RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
TOP3B-213ENST00000457179 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
TOP3B-213ENST00000457179 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
TOP3B-213ENST00000457179 KRTAP19-6Q3LI70 58 aa4.77□□□□□ -1.65
TOP3B-213ENST00000457179 KRTAP2-3P0C7H8 128 aa4.7□□□□□ -1.66
TOP3B-213ENST00000457179 KRTAP2-4Q9BYR9 128 aa4.7□□□□□ -1.66
TOP3B-213ENST00000457179 KRTAP2-1Q9BYU5 128 aa4.7□□□□□ -1.66
TOP3B-213ENST00000457179 MDN1Q9NU22 5596 aa4.67□□□□□ -1.66
TOP3B-213ENST00000457179 MT1EP04732 61 aa4.66□□□□□ -1.66
TOP3B-213ENST00000457179 SYNE1Q8NF91 8797 aaKnown RBP4.63□□□□□ -1.67
TOP3B-213ENST00000457179 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
TOP3B-213ENST00000457179 KRTAP4-3Q9BYR4 195 aa4.63□□□□□ -1.67
TOP3B-213ENST00000457179 MT1LQ93083 61 aa4.61□□□□□ -1.67
TOP3B-213ENST00000457179 OBSCNQ5VST9 7968 aa4.61□□□□□ -1.67
TOP3B-213ENST00000457179 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.59□□□□□ -1.68
TOP3B-213ENST00000457179 LOC100996750A0A140TA64 210 aa4.53□□□□□ -1.68
TOP3B-213ENST00000457179 MT1GP13640 62 aa4.48□□□□□ -1.69
TOP3B-213ENST00000457179 KRTAP9-7A8MTY7 169 aa4.46□□□□□ -1.7
TOP3B-213ENST00000457179 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
TOP3B-213ENST00000457179 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
TOP3B-213ENST00000457179 MT1MQ8N339 61 aa4.39□□□□□ -1.71
TOP3B-213ENST00000457179 KRTAP6-3Q3LI67 103 aa4.27□□□□□ -1.73
TOP3B-213ENST00000457179 LCE5AQ5TCM9 118 aa4.26□□□□□ -1.73
TOP3B-213ENST00000457179 SPRR2EP22531 72 aa4.24□□□□□ -1.73
TOP3B-213ENST00000457179 SPRR2BP35325 72 aa4.24□□□□□ -1.73
TOP3B-213ENST00000457179 SPRR2AP35326 72 aa4.24□□□□□ -1.73
TOP3B-213ENST00000457179 KRTAP19-4Q3LI73 84 aa4.24□□□□□ -1.73
TOP3B-213ENST00000457179 NEBP20929 6669 aa4.22□□□□□ -1.73
TOP3B-213ENST00000457179 KRTAP5-9P26371 169 aa4.19□□□□□ -1.74
TOP3B-213ENST00000457179 LCE1AQ5T7P2 110 aa4.18□□□□□ -1.74
TOP3B-213ENST00000457179 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
TOP3B-213ENST00000457179 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
TOP3B-213ENST00000457179 SPRR2DP22532 72 aa4.04□□□□□ -1.76
TOP3B-213ENST00000457179 PRM1P04553 51 aa4□□□□□ -1.77
TOP3B-213ENST00000457179 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
TOP3B-213ENST00000457179 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
TOP3B-213ENST00000457179 KRTAP20-1Q3LI63 56 aa3.88□□□□□ -1.79
TOP3B-213ENST00000457179 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
TOP3B-213ENST00000457179 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
TOP3B-213ENST00000457179 MT1AP04731 61 aa3.82□□□□□ -1.8
TOP3B-213ENST00000457179 MT4P47944 62 aa3.73□□□□□ -1.81
TOP3B-213ENST00000457179 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
TOP3B-213ENST00000457179 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
TOP3B-213ENST00000457179 KRTAP9-4Q9BYQ2 154 aa3.63□□□□□ -1.83
TOP3B-213ENST00000457179 KRTAP4-6Q9BYQ5 205 aa3.62□□□□□ -1.83
TOP3B-213ENST00000457179 HMCN1Q96RW7 5635 aa3.55□□□□□ -1.84
TOP3B-213ENST00000457179 MT3P25713 68 aa3.51□□□□□ -1.85
TOP3B-213ENST00000457179 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
TOP3B-213ENST00000457179 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
TOP3B-213ENST00000457179 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.86
TOP3B-213ENST00000457179 LCE4AQ5TA78 99 aa3.36□□□□□ -1.87
TOP3B-213ENST00000457179 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
TOP3B-213ENST00000457179 AHNAK2Q8IVF2 5795 aa3.24□□□□□ -1.89
TOP3B-213ENST00000457179 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
TOP3B-213ENST00000457179 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
TOP3B-213ENST00000457179 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
TOP3B-213ENST00000457179 KRTAP5-3Q6L8H2 238 aa3.13□□□□□ -1.91
TOP3B-213ENST00000457179 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
TOP3B-213ENST00000457179 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
TOP3B-213ENST00000457179 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
TOP3B-213ENST00000457179 KRTAP4-11Q9BYQ6 195 aa3.02□□□□□ -1.93
TOP3B-213ENST00000457179 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
TOP3B-213ENST00000457179 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
TOP3B-213ENST00000457179 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
TOP3B-213ENST00000457179 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
TOP3B-213ENST00000457179 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
TOP3B-213ENST00000457179 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
TOP3B-213ENST00000457179 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
TOP3B-213ENST00000457179 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
TOP3B-213ENST00000457179 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
TOP3B-213ENST00000457179 KRTAP9-9Q9BYP9 154 aa2.56□□□□□ -2
TOP3B-213ENST00000457179 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
TOP3B-213ENST00000457179 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
TOP3B-213ENST00000457179 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
TOP3B-213ENST00000457179 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
TOP3B-213ENST00000457179 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
TOP3B-213ENST00000457179 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
TOP3B-213ENST00000457179 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 9.9 ms