RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 KRTAP13-4Q3LI77 160 aa3.31□□□□□ -1.88
PKP4-207ENST00000457109 SPINT4Q6UDR6 99 aa3.3□□□□□ -1.88
PKP4-207ENST00000457109 LCE5AQ5TCM9 118 aa3.29□□□□□ -1.88
PKP4-207ENST00000457109 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
PKP4-207ENST00000457109 KRTAP25-1Q3LHN0 102 aa3.28□□□□□ -1.88
PKP4-207ENST00000457109 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
PKP4-207ENST00000457109 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
PKP4-207ENST00000457109 MT1EP04732 61 aa3.27□□□□□ -1.89
PKP4-207ENST00000457109 KRTAP4-9Q9BYQ8 210 aa3.27□□□□□ -1.89
PKP4-207ENST00000457109 UQCR11O14957 56 aa3.26□□□□□ -1.89
PKP4-207ENST00000457109 KRTAP19-7Q3SYF9 63 aa3.26□□□□□ -1.89
PKP4-207ENST00000457109 PP632Q6XCG6 107 aa3.26□□□□□ -1.89
PKP4-207ENST00000457109 LOC100996750A0A140TA64 210 aa3.25□□□□□ -1.89
PKP4-207ENST00000457109 A0A1B0GU33 70 aa3.25□□□□□ -1.89
PKP4-207ENST00000457109 KRTAP4-6Q9BYQ5 205 aa3.25□□□□□ -1.89
PKP4-207ENST00000457109 SPATA8Q6RVD6 105 aa3.24□□□□□ -1.89
PKP4-207ENST00000457109 MT1GP13640 62 aa3.23□□□□□ -1.89
PKP4-207ENST00000457109 A0A1B0GU69 56 aa3.2□□□□□ -1.9
PKP4-207ENST00000457109 KRTAP19-5Q3LI72 72 aa3.2□□□□□ -1.9
PKP4-207ENST00000457109 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
PKP4-207ENST00000457109 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
PKP4-207ENST00000457109 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
PKP4-207ENST00000457109 MT4P47944 62 aa3.15□□□□□ -1.91
PKP4-207ENST00000457109 TNP1P09430 55 aa3.14□□□□□ -1.91
PKP4-207ENST00000457109 KRTAP15-1Q3LI76 137 aa3.12□□□□□ -1.91
PKP4-207ENST00000457109 MT1MQ8N339 61 aa3.12□□□□□ -1.91
PKP4-207ENST00000457109 MT1LQ93083 61 aa3.11□□□□□ -1.91
PKP4-207ENST00000457109 C10orf95Q9H7T3 257 aa3.09□□□□□ -1.91
PKP4-207ENST00000457109 LCE3AQ5TA76 89 aa3.07□□□□□ -1.92
PKP4-207ENST00000457109 HMCN1Q96RW7 5635 aa3.05□□□□□ -1.92
PKP4-207ENST00000457109 KRTAP4-3Q9BYR4 195 aa3.03□□□□□ -1.92
PKP4-207ENST00000457109 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
PKP4-207ENST00000457109 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
PKP4-207ENST00000457109 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
PKP4-207ENST00000457109 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
PKP4-207ENST00000457109 KRTAP4-7Q9BYR0 210 aa2.93□□□□□ -1.94
PKP4-207ENST00000457109 KRTAP12-4P60329 112 aa2.92□□□□□ -1.94
PKP4-207ENST00000457109 KRTAP5-3Q6L8H2 238 aa2.9□□□□□ -1.95
PKP4-207ENST00000457109 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
PKP4-207ENST00000457109 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
PKP4-207ENST00000457109 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
PKP4-207ENST00000457109 KRTAP19-4Q3LI73 84 aa2.86□□□□□ -1.95
PKP4-207ENST00000457109 INE1O15225 51 aa2.84□□□□□ -1.95
PKP4-207ENST00000457109 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
PKP4-207ENST00000457109 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
PKP4-207ENST00000457109 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
PKP4-207ENST00000457109 KRTAP9-4Q9BYQ2 154 aa2.75□□□□□ -1.97
PKP4-207ENST00000457109 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
PKP4-207ENST00000457109 LCE3CQ5T5A8 94 aa2.74□□□□□ -1.97
PKP4-207ENST00000457109 KRTAP4-11Q9BYQ6 195 aa2.68□□□□□ -1.98
PKP4-207ENST00000457109 MT1AP04731 61 aa2.65□□□□□ -1.99
PKP4-207ENST00000457109 KRTAP6-1Q3LI64 71 aa2.62□□□□□ -1.99
PKP4-207ENST00000457109 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
PKP4-207ENST00000457109 KRTAP6-2Q3LI66 62 aa2.56□□□□□ -2
PKP4-207ENST00000457109 KRTAP5-8O75690 187 aa2.55□□□□□ -2
PKP4-207ENST00000457109 OBSCNQ5VST9 7968 aa2.53□□□□□ -2
PKP4-207ENST00000457109 KRTAP4-2Q9BYR5 136 aa2.52□□□□□ -2.01
PKP4-207ENST00000457109 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
PKP4-207ENST00000457109 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
PKP4-207ENST00000457109 MT3P25713 68 aa2.49□□□□□ -2.01
PKP4-207ENST00000457109 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
PKP4-207ENST00000457109 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
PKP4-207ENST00000457109 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
PKP4-207ENST00000457109 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
PKP4-207ENST00000457109 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
PKP4-207ENST00000457109 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
PKP4-207ENST00000457109 LCE1FQ5T754 118 aa2.04□□□□□ -2.08
PKP4-207ENST00000457109 LCE3DQ9BYE3 92 aa1.98□□□□□ -2.09
PKP4-207ENST00000457109 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.11
PKP4-207ENST00000457109 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
PKP4-207ENST00000457109 LCE3EQ5T5B0 92 aa1.84□□□□□ -2.11
PKP4-207ENST00000457109 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
PKP4-207ENST00000457109 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
PKP4-207ENST00000457109 KRTAP4-4Q9BYR3 166 aa1.62□□□□□ -2.15
PKP4-207ENST00000457109 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
PKP4-207ENST00000457109 PRM1P04553 51 aa1.53□□□□□ -2.16
PKP4-207ENST00000457109 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
PKP4-207ENST00000457109 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 70.5 ms