RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
SMPD4-215ENST00000457039 KRTAP25-1Q3LHN0 102 aa5.19□□□□□ -1.58
SMPD4-215ENST00000457039 SPRR2DP22532 72 aa5.15□□□□□ -1.59
SMPD4-215ENST00000457039 KRTAP19-3Q7Z4W3 81 aa5.14□□□□□ -1.59
SMPD4-215ENST00000457039 LCE5AQ5TCM9 118 aa5.13□□□□□ -1.59
SMPD4-215ENST00000457039 PRAC1Q96KF2 57 aa5.13□□□□□ -1.59
SMPD4-215ENST00000457039 KRTAP2-3P0C7H8 128 aa5.12□□□□□ -1.59
SMPD4-215ENST00000457039 KRTAP2-4Q9BYR9 128 aa5.12□□□□□ -1.59
SMPD4-215ENST00000457039 ROMO1P60602 79 aa5.06□□□□□ -1.6
SMPD4-215ENST00000457039 MT1LQ93083 61 aa5.06□□□□□ -1.6
SMPD4-215ENST00000457039 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
SMPD4-215ENST00000457039 MT1GP13640 62 aa5.04□□□□□ -1.6
SMPD4-215ENST00000457039 KRTAP12-3P60328 96 aa5.04□□□□□ -1.6
SMPD4-215ENST00000457039 LCE3BQ5TA77 95 aa5□□□□□ -1.61
SMPD4-215ENST00000457039 KRTAP2-2Q9BYT5 123 aa4.98□□□□□ -1.61
SMPD4-215ENST00000457039 KRTAP2-1Q9BYU5 128 aa4.98□□□□□ -1.61
SMPD4-215ENST00000457039 PP632Q6XCG6 107 aa4.97□□□□□ -1.61
SMPD4-215ENST00000457039 MT1MQ8N339 61 aa4.97□□□□□ -1.61
SMPD4-215ENST00000457039 DSTQ03001 7570 aaKnown RBP4.96□□□□□ -1.62
SMPD4-215ENST00000457039 A0A0A0MQY5 61 aa4.93□□□□□ -1.62
SMPD4-215ENST00000457039 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
SMPD4-215ENST00000457039 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
SMPD4-215ENST00000457039 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
SMPD4-215ENST00000457039 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
SMPD4-215ENST00000457039 GPR98Q8WXG9 6306 aa4.71□□□□□ -1.66
SMPD4-215ENST00000457039 LCE3CQ5T5A8 94 aa4.67□□□□□ -1.66
SMPD4-215ENST00000457039 KRTAP5-4Q6L8H1 288 aa4.6□□□□□ -1.67
SMPD4-215ENST00000457039 NDUFAF8A1L188 74 aa4.59□□□□□ -1.67
SMPD4-215ENST00000457039 LUZP6Q538Z0 58 aa4.59□□□□□ -1.67
SMPD4-215ENST00000457039 LCE4AQ5TA78 99 aa4.59□□□□□ -1.67
SMPD4-215ENST00000457039 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
SMPD4-215ENST00000457039 KRTAP5-5Q701N2 237 aaPredicted RBP4.56□□□□□ -1.68
SMPD4-215ENST00000457039 LOC100996750A0A140TA64 210 aa4.55□□□□□ -1.68
SMPD4-215ENST00000457039 LCE1DQ5T752 114 aa4.52□□□□□ -1.69
SMPD4-215ENST00000457039 HMCN1Q96RW7 5635 aa4.49□□□□□ -1.69
SMPD4-215ENST00000457039 MT4P47944 62 aa4.48□□□□□ -1.69
SMPD4-215ENST00000457039 SYNE1Q8NF91 8797 aaKnown RBP4.45□□□□□ -1.7
SMPD4-215ENST00000457039 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
SMPD4-215ENST00000457039 KRTAP4-6Q9BYQ5 205 aa4.42□□□□□ -1.7
SMPD4-215ENST00000457039 SPRR5A0A1B0GTR4 108 aa4.31□□□□□ -1.72
SMPD4-215ENST00000457039 MT1AP04731 61 aa4.31□□□□□ -1.72
SMPD4-215ENST00000457039 KRTAP12-4P60329 112 aa4.31□□□□□ -1.72
SMPD4-215ENST00000457039 KRTAP20-2Q3LI61 65 aa4.3□□□□□ -1.72
SMPD4-215ENST00000457039 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
SMPD4-215ENST00000457039 AHNAK2Q8IVF2 5795 aa4.26□□□□□ -1.73
SMPD4-215ENST00000457039 KRTAP5-10Q6L8G5 202 aa4.2□□□□□ -1.74
SMPD4-215ENST00000457039 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
SMPD4-215ENST00000457039 KRTAP9-4Q9BYQ2 154 aa4.14□□□□□ -1.75
SMPD4-215ENST00000457039 KRTAP5-7Q6L8G8 165 aa4.1□□□□□ -1.75
SMPD4-215ENST00000457039 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
SMPD4-215ENST00000457039 KRTAP6-2Q3LI66 62 aa4.01□□□□□ -1.77
SMPD4-215ENST00000457039 INE1O15225 51 aa3.98□□□□□ -1.77
SMPD4-215ENST00000457039 MT3P25713 68 aa3.91□□□□□ -1.78
SMPD4-215ENST00000457039 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
SMPD4-215ENST00000457039 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
SMPD4-215ENST00000457039 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
SMPD4-215ENST00000457039 AHNAKQ09666 5890 aaKnown RBP3.66□□□□□ -1.82
SMPD4-215ENST00000457039 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
SMPD4-215ENST00000457039 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
SMPD4-215ENST00000457039 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
SMPD4-215ENST00000457039 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
SMPD4-215ENST00000457039 KRTAP9-9Q9BYP9 154 aa3.44□□□□□ -1.86
SMPD4-215ENST00000457039 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
SMPD4-215ENST00000457039 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.87
SMPD4-215ENST00000457039 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
SMPD4-215ENST00000457039 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
SMPD4-215ENST00000457039 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
SMPD4-215ENST00000457039 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
SMPD4-215ENST00000457039 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
SMPD4-215ENST00000457039 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
SMPD4-215ENST00000457039 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
SMPD4-215ENST00000457039 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
SMPD4-215ENST00000457039 PRM1P04553 51 aa2.61□□□□□ -1.99
SMPD4-215ENST00000457039 PHGR1C9JFL3 82 aa2.54□□□□□ -2
SMPD4-215ENST00000457039 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
SMPD4-215ENST00000457039 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
SMPD4-215ENST00000457039 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
SMPD4-215ENST00000457039 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 6.8 ms