RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 MT1LQ93083 61 aa5.04□□□□□ -1.6
TIMP1-205ENST00000456754 KRTAP12-3P60328 96 aa5.03□□□□□ -1.6
TIMP1-205ENST00000456754 KRTAP2-3P0C7H8 128 aa5□□□□□ -1.61
TIMP1-205ENST00000456754 KRTAP2-4Q9BYR9 128 aa5□□□□□ -1.61
TIMP1-205ENST00000456754 MT1GP13640 62 aa4.95□□□□□ -1.62
TIMP1-205ENST00000456754 LCE3BQ5TA77 95 aa4.94□□□□□ -1.62
TIMP1-205ENST00000456754 MT1MQ8N339 61 aa4.94□□□□□ -1.62
TIMP1-205ENST00000456754 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
TIMP1-205ENST00000456754 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
TIMP1-205ENST00000456754 KRTAP4-7Q9BYR0 210 aa4.9□□□□□ -1.63
TIMP1-205ENST00000456754 PP632Q6XCG6 107 aa4.86□□□□□ -1.63
TIMP1-205ENST00000456754 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
TIMP1-205ENST00000456754 KRTAP2-1Q9BYU5 128 aa4.85□□□□□ -1.63
TIMP1-205ENST00000456754 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
TIMP1-205ENST00000456754 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
TIMP1-205ENST00000456754 PMAIP1Q13794 54 aa4.74□□□□□ -1.65
TIMP1-205ENST00000456754 SVIPQ8NHG7 77 aa4.71□□□□□ -1.66
TIMP1-205ENST00000456754 LCE3CQ5T5A8 94 aa4.67□□□□□ -1.66
TIMP1-205ENST00000456754 PRO0628Q9UI54 55 aa4.65□□□□□ -1.67
TIMP1-205ENST00000456754 LOC100996750A0A140TA64 210 aa4.62□□□□□ -1.67
TIMP1-205ENST00000456754 PRAC1Q96KF2 57 aa4.62□□□□□ -1.67
TIMP1-205ENST00000456754 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
TIMP1-205ENST00000456754 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
TIMP1-205ENST00000456754 KRTAP5-4Q6L8H1 288 aa4.5□□□□□ -1.69
TIMP1-205ENST00000456754 KRTAP5-5Q701N2 237 aaPredicted RBP4.5□□□□□ -1.69
TIMP1-205ENST00000456754 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
TIMP1-205ENST00000456754 MT4P47944 62 aa4.48□□□□□ -1.69
TIMP1-205ENST00000456754 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
TIMP1-205ENST00000456754 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
TIMP1-205ENST00000456754 KRTAP4-6Q9BYQ5 205 aa4.41□□□□□ -1.7
TIMP1-205ENST00000456754 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
TIMP1-205ENST00000456754 HMCN1Q96RW7 5635 aa4.33□□□□□ -1.72
TIMP1-205ENST00000456754 GPR98Q8WXG9 6306 aa4.32□□□□□ -1.72
TIMP1-205ENST00000456754 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
TIMP1-205ENST00000456754 MT1AP04731 61 aa4.27□□□□□ -1.73
TIMP1-205ENST00000456754 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
TIMP1-205ENST00000456754 KRTAP20-2Q3LI61 65 aa4.24□□□□□ -1.73
TIMP1-205ENST00000456754 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
TIMP1-205ENST00000456754 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
TIMP1-205ENST00000456754 KRTAP5-3Q6L8H2 238 aa4.11□□□□□ -1.75
TIMP1-205ENST00000456754 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
TIMP1-205ENST00000456754 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
TIMP1-205ENST00000456754 KRTAP6-2Q3LI66 62 aa4.01□□□□□ -1.77
TIMP1-205ENST00000456754 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
TIMP1-205ENST00000456754 KRTAP5-10Q6L8G5 202 aa3.97□□□□□ -1.77
TIMP1-205ENST00000456754 MT3P25713 68 aa3.85□□□□□ -1.79
TIMP1-205ENST00000456754 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
TIMP1-205ENST00000456754 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
TIMP1-205ENST00000456754 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
TIMP1-205ENST00000456754 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
TIMP1-205ENST00000456754 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
TIMP1-205ENST00000456754 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
TIMP1-205ENST00000456754 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
TIMP1-205ENST00000456754 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
TIMP1-205ENST00000456754 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
TIMP1-205ENST00000456754 KRTAP9-9Q9BYP9 154 aa3.36□□□□□ -1.87
TIMP1-205ENST00000456754 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
TIMP1-205ENST00000456754 H3BS24 57 aa3.32□□□□□ -1.88
TIMP1-205ENST00000456754 AHNAKQ09666 5890 aaKnown RBP3.3□□□□□ -1.88
TIMP1-205ENST00000456754 LCE1BQ5T7P3 118 aa3.3□□□□□ -1.88
TIMP1-205ENST00000456754 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
TIMP1-205ENST00000456754 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
TIMP1-205ENST00000456754 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
TIMP1-205ENST00000456754 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
TIMP1-205ENST00000456754 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
TIMP1-205ENST00000456754 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
TIMP1-205ENST00000456754 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
TIMP1-205ENST00000456754 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
TIMP1-205ENST00000456754 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
TIMP1-205ENST00000456754 PRM1P04553 51 aa2.67□□□□□ -1.98
TIMP1-205ENST00000456754 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
TIMP1-205ENST00000456754 INE1O15225 51 aa2.63□□□□□ -1.99
TIMP1-205ENST00000456754 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
TIMP1-205ENST00000456754 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
TIMP1-205ENST00000456754 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
TIMP1-205ENST00000456754 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
TIMP1-205ENST00000456754 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms