RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 V9GYY9 64 aa4.76□□□□□ -1.65
EPCAM-204ENST00000456133 COA5Q86WW8 74 aa4.75□□□□□ -1.65
EPCAM-204ENST00000456133 ACYP2P14621 99 aa4.73□□□□□ -1.65
EPCAM-204ENST00000456133 Q1T7F1 81 aa4.73□□□□□ -1.65
EPCAM-204ENST00000456133 KRTAP4-3Q9BYR4 195 aa4.72□□□□□ -1.65
EPCAM-204ENST00000456133 A0A0D9SG42 100 aa4.72□□□□□ -1.65
EPCAM-204ENST00000456133 KRTAP13-4Q3LI77 160 aa4.71□□□□□ -1.66
EPCAM-204ENST00000456133 SPTSSBQ8NFR3 76 aa4.7□□□□□ -1.66
EPCAM-204ENST00000456133 MT1LQ93083 61 aa4.69□□□□□ -1.66
EPCAM-204ENST00000456133 SPRR5A0A1B0GTR4 108 aa4.67□□□□□ -1.66
EPCAM-204ENST00000456133 CHKB-CPT1BH3BT56 60 aa4.65□□□□□ -1.67
EPCAM-204ENST00000456133 LINC01558Q9Y6Z2 57 aa4.62□□□□□ -1.67
EPCAM-204ENST00000456133 PSPHP1O15172 72 aa4.59□□□□□ -1.67
EPCAM-204ENST00000456133 PRR15LQ9BU68 103 aa4.59□□□□□ -1.67
EPCAM-204ENST00000456133 KRTAP20-2Q3LI61 65 aa4.58□□□□□ -1.68
EPCAM-204ENST00000456133 PRO0628Q9UI54 55 aa4.54□□□□□ -1.68
EPCAM-204ENST00000456133 BRK1Q8WUW1 75 aa4.53□□□□□ -1.68
EPCAM-204ENST00000456133 A0A1B0GU69 56 aa4.51□□□□□ -1.69
EPCAM-204ENST00000456133 SVIPQ8NHG7 77 aa4.5□□□□□ -1.69
EPCAM-204ENST00000456133 C10orf95Q9H7T3 257 aa4.49□□□□□ -1.69
EPCAM-204ENST00000456133 A6NED7 52 aa4.48□□□□□ -1.69
EPCAM-204ENST00000456133 SEC61GP60059 68 aa4.47□□□□□ -1.69
EPCAM-204ENST00000456133 SPINT4Q6UDR6 99 aa4.47□□□□□ -1.69
EPCAM-204ENST00000456133 LCE3AQ5TA76 89 aa4.46□□□□□ -1.7
EPCAM-204ENST00000456133 CDC42SE1Q9NRR8 79 aa4.45□□□□□ -1.7
EPCAM-204ENST00000456133 KRTAP5-5Q701N2 237 aaPredicted RBP4.42□□□□□ -1.7
EPCAM-204ENST00000456133 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
EPCAM-204ENST00000456133 UQCR11O14957 56 aa4.41□□□□□ -1.7
EPCAM-204ENST00000456133 SPATA8Q6RVD6 105 aa4.41□□□□□ -1.7
EPCAM-204ENST00000456133 KRTAP12-1P59990 96 aa4.4□□□□□ -1.71
EPCAM-204ENST00000456133 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
EPCAM-204ENST00000456133 MIR22HGQ0VDD5 57 aa4.36□□□□□ -1.71
EPCAM-204ENST00000456133 A8MU10 97 aa4.33□□□□□ -1.72
EPCAM-204ENST00000456133 A0A1B0GU33 70 aa4.31□□□□□ -1.72
EPCAM-204ENST00000456133 TNP1P09430 55 aa4.3□□□□□ -1.72
EPCAM-204ENST00000456133 PMAIP1Q13794 54 aa4.3□□□□□ -1.72
EPCAM-204ENST00000456133 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
EPCAM-204ENST00000456133 AHNAKQ09666 5890 aaKnown RBP4.25□□□□□ -1.73
EPCAM-204ENST00000456133 H3BS24 57 aa4.22□□□□□ -1.73
EPCAM-204ENST00000456133 MUC5ACP98088 5654 aa4.22□□□□□ -1.73
EPCAM-204ENST00000456133 KTN1-AS1Q86SY8 53 aa4.19□□□□□ -1.74
EPCAM-204ENST00000456133 MUC5BQ9HC84 5762 aaPredicted RBP4.18□□□□□ -1.74
EPCAM-204ENST00000456133 K7ERS5 55 aa4.18□□□□□ -1.74
EPCAM-204ENST00000456133 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
EPCAM-204ENST00000456133 KRTAP5-2Q701N4 177 aa4.14□□□□□ -1.75
EPCAM-204ENST00000456133 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
EPCAM-204ENST00000456133 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
EPCAM-204ENST00000456133 ROMO1P60602 79 aa4□□□□□ -1.77
EPCAM-204ENST00000456133 MT1AP04731 61 aa3.99□□□□□ -1.77
EPCAM-204ENST00000456133 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
EPCAM-204ENST00000456133 PRAC1Q96KF2 57 aa3.96□□□□□ -1.78
EPCAM-204ENST00000456133 KRTAP6-2Q3LI66 62 aa3.91□□□□□ -1.78
EPCAM-204ENST00000456133 KRTAP25-1Q3LHN0 102 aa3.9□□□□□ -1.79
EPCAM-204ENST00000456133 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
EPCAM-204ENST00000456133 KRTAP15-1Q3LI76 137 aa3.83□□□□□ -1.8
EPCAM-204ENST00000456133 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
EPCAM-204ENST00000456133 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
EPCAM-204ENST00000456133 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
EPCAM-204ENST00000456133 KRTAP23-1A1A580 65 aa3.66□□□□□ -1.82
EPCAM-204ENST00000456133 MT3P25713 68 aa3.66□□□□□ -1.82
EPCAM-204ENST00000456133 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
EPCAM-204ENST00000456133 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
EPCAM-204ENST00000456133 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
EPCAM-204ENST00000456133 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
EPCAM-204ENST00000456133 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
EPCAM-204ENST00000456133 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
EPCAM-204ENST00000456133 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.9
EPCAM-204ENST00000456133 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
EPCAM-204ENST00000456133 A0A0A0MQY5 61 aa2.95□□□□□ -1.94
EPCAM-204ENST00000456133 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
EPCAM-204ENST00000456133 INE1O15225 51 aa2.75□□□□□ -1.97
EPCAM-204ENST00000456133 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
EPCAM-204ENST00000456133 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
EPCAM-204ENST00000456133 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
EPCAM-204ENST00000456133 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
EPCAM-204ENST00000456133 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
EPCAM-204ENST00000456133 PRM1P04553 51 aa2.07□□□□□ -2.08
EPCAM-204ENST00000456133 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 223 ms