RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 LOC100996750A0A140TA64 210 aa5.2□□□□□ -1.58
HMGXB4-204ENST00000455359 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
HMGXB4-204ENST00000455359 KRTAP12-3P60328 96 aa5.19□□□□□ -1.58
HMGXB4-204ENST00000455359 KRTAP19-3Q7Z4W3 81 aa5.19□□□□□ -1.58
HMGXB4-204ENST00000455359 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
HMGXB4-204ENST00000455359 SPRR2DP22532 72 aa5.15□□□□□ -1.59
HMGXB4-204ENST00000455359 LCE5AQ5TCM9 118 aa5.15□□□□□ -1.59
HMGXB4-204ENST00000455359 MT1GP13640 62 aa5.13□□□□□ -1.59
HMGXB4-204ENST00000455359 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
HMGXB4-204ENST00000455359 MT1LQ93083 61 aa5.12□□□□□ -1.59
HMGXB4-204ENST00000455359 KRTAP20-1Q3LI63 56 aa5.11□□□□□ -1.59
HMGXB4-204ENST00000455359 KRTAP2-3P0C7H8 128 aa5.1□□□□□ -1.59
HMGXB4-204ENST00000455359 KRTAP2-4Q9BYR9 128 aa5.1□□□□□ -1.59
HMGXB4-204ENST00000455359 PMAIP1Q13794 54 aa5.04□□□□□ -1.6
HMGXB4-204ENST00000455359 MT1MQ8N339 61 aa5□□□□□ -1.61
HMGXB4-204ENST00000455359 PRO0628Q9UI54 55 aa5□□□□□ -1.61
HMGXB4-204ENST00000455359 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
HMGXB4-204ENST00000455359 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
HMGXB4-204ENST00000455359 KRTAP2-2Q9BYT5 123 aa4.97□□□□□ -1.61
HMGXB4-204ENST00000455359 KRTAP2-1Q9BYU5 128 aa4.97□□□□□ -1.61
HMGXB4-204ENST00000455359 DSTQ03001 7570 aaKnown RBP4.96□□□□□ -1.62
HMGXB4-204ENST00000455359 KRTAP4-12Q9BQ66 201 aa4.95□□□□□ -1.62
HMGXB4-204ENST00000455359 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
HMGXB4-204ENST00000455359 KRTAP4-7Q9BYR0 210 aa4.81□□□□□ -1.64
HMGXB4-204ENST00000455359 KRTAP4-3Q9BYR4 195 aa4.81□□□□□ -1.64
HMGXB4-204ENST00000455359 LCE4AQ5TA78 99 aa4.76□□□□□ -1.65
HMGXB4-204ENST00000455359 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
HMGXB4-204ENST00000455359 KTN1-AS1Q86SY8 53 aa4.69□□□□□ -1.66
HMGXB4-204ENST00000455359 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
HMGXB4-204ENST00000455359 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
HMGXB4-204ENST00000455359 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
HMGXB4-204ENST00000455359 KRTAP5-5Q701N2 237 aaPredicted RBP4.57□□□□□ -1.68
HMGXB4-204ENST00000455359 A0A0A0MQY5 61 aa4.55□□□□□ -1.68
HMGXB4-204ENST00000455359 KRTAP4-9Q9BYQ8 210 aa4.48□□□□□ -1.69
HMGXB4-204ENST00000455359 KRTAP9-6A8MVA2 160 aa4.47□□□□□ -1.69
HMGXB4-204ENST00000455359 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
HMGXB4-204ENST00000455359 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
HMGXB4-204ENST00000455359 MT4P47944 62 aa4.44□□□□□ -1.7
HMGXB4-204ENST00000455359 KRTAP12-4P60329 112 aa4.4□□□□□ -1.71
HMGXB4-204ENST00000455359 MT1AP04731 61 aa4.37□□□□□ -1.71
HMGXB4-204ENST00000455359 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
HMGXB4-204ENST00000455359 SPRR5A0A1B0GTR4 108 aa4.36□□□□□ -1.71
HMGXB4-204ENST00000455359 GPR98Q8WXG9 6306 aa4.29□□□□□ -1.72
HMGXB4-204ENST00000455359 KRTAP20-2Q3LI61 65 aa4.28□□□□□ -1.72
HMGXB4-204ENST00000455359 KRTAP6-1Q3LI64 71 aa4.28□□□□□ -1.72
HMGXB4-204ENST00000455359 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
HMGXB4-204ENST00000455359 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
HMGXB4-204ENST00000455359 AHNAK2Q8IVF2 5795 aa4.13□□□□□ -1.75
HMGXB4-204ENST00000455359 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
HMGXB4-204ENST00000455359 KRTAP4-2Q9BYR5 136 aa4.06□□□□□ -1.76
HMGXB4-204ENST00000455359 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
HMGXB4-204ENST00000455359 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
HMGXB4-204ENST00000455359 MT3P25713 68 aa4□□□□□ -1.77
HMGXB4-204ENST00000455359 KRTAP5-10Q6L8G5 202 aa3.98□□□□□ -1.77
HMGXB4-204ENST00000455359 KRTAP5-7Q6L8G8 165 aa3.8□□□□□ -1.8
HMGXB4-204ENST00000455359 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
HMGXB4-204ENST00000455359 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
HMGXB4-204ENST00000455359 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
HMGXB4-204ENST00000455359 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
HMGXB4-204ENST00000455359 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
HMGXB4-204ENST00000455359 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
HMGXB4-204ENST00000455359 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
HMGXB4-204ENST00000455359 MUC5BQ9HC84 5762 aaPredicted RBP3.41□□□□□ -1.86
HMGXB4-204ENST00000455359 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
HMGXB4-204ENST00000455359 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
HMGXB4-204ENST00000455359 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
HMGXB4-204ENST00000455359 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
HMGXB4-204ENST00000455359 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
HMGXB4-204ENST00000455359 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
HMGXB4-204ENST00000455359 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
HMGXB4-204ENST00000455359 INE1O15225 51 aa2.96□□□□□ -1.93
HMGXB4-204ENST00000455359 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
HMGXB4-204ENST00000455359 PRM1P04553 51 aa2.72□□□□□ -1.97
HMGXB4-204ENST00000455359 PHGR1C9JFL3 82 aa2.56□□□□□ -2
HMGXB4-204ENST00000455359 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
HMGXB4-204ENST00000455359 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
HMGXB4-204ENST00000455359 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
HMGXB4-204ENST00000455359 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 78.8 ms