RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 NEBP20929 6669 aa4.14□□□□□ -1.75
TRAF4-206ENST00000454852 MDN1Q9NU22 5596 aa4.12□□□□□ -1.75
TRAF4-206ENST00000454852 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
TRAF4-206ENST00000454852 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.75
TRAF4-206ENST00000454852 SPRR2EP22531 72 aa4.04□□□□□ -1.76
TRAF4-206ENST00000454852 SPRR2BP35325 72 aa4.04□□□□□ -1.76
TRAF4-206ENST00000454852 SPRR2AP35326 72 aa4.04□□□□□ -1.76
TRAF4-206ENST00000454852 KRTAP19-3Q7Z4W3 81 aa4.04□□□□□ -1.76
TRAF4-206ENST00000454852 MT1LQ93083 61 aa4.03□□□□□ -1.76
TRAF4-206ENST00000454852 LCE5AQ5TCM9 118 aa4.02□□□□□ -1.77
TRAF4-206ENST00000454852 MT1GP13640 62 aa4.01□□□□□ -1.77
TRAF4-206ENST00000454852 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
TRAF4-206ENST00000454852 KRTAP15-1Q3LI76 137 aa3.98□□□□□ -1.77
TRAF4-206ENST00000454852 KRTAP20-1Q3LI63 56 aa3.97□□□□□ -1.77
TRAF4-206ENST00000454852 MT1MQ8N339 61 aa3.92□□□□□ -1.78
TRAF4-206ENST00000454852 SPRR2DP22532 72 aa3.91□□□□□ -1.78
TRAF4-206ENST00000454852 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
TRAF4-206ENST00000454852 KRTAP2-3P0C7H8 128 aa3.88□□□□□ -1.79
TRAF4-206ENST00000454852 KRTAP2-4Q9BYR9 128 aa3.88□□□□□ -1.79
TRAF4-206ENST00000454852 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
TRAF4-206ENST00000454852 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
TRAF4-206ENST00000454852 KRTAP4-7Q9BYR0 210 aa3.8□□□□□ -1.8
TRAF4-206ENST00000454852 LCE3BQ5TA77 95 aa3.78□□□□□ -1.8
TRAF4-206ENST00000454852 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
TRAF4-206ENST00000454852 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
TRAF4-206ENST00000454852 KRTAP2-1Q9BYU5 128 aa3.75□□□□□ -1.81
TRAF4-206ENST00000454852 DSTQ03001 7570 aaKnown RBP3.74□□□□□ -1.81
TRAF4-206ENST00000454852 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
TRAF4-206ENST00000454852 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
TRAF4-206ENST00000454852 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
TRAF4-206ENST00000454852 LOC100996750A0A140TA64 210 aa3.58□□□□□ -1.84
TRAF4-206ENST00000454852 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
TRAF4-206ENST00000454852 LCE4AQ5TA78 99 aa3.53□□□□□ -1.84
TRAF4-206ENST00000454852 MT1AP04731 61 aa3.45□□□□□ -1.86
TRAF4-206ENST00000454852 SYNE1Q8NF91 8797 aaKnown RBP3.44□□□□□ -1.86
TRAF4-206ENST00000454852 KRTAP4-9Q9BYQ8 210 aa3.41□□□□□ -1.86
TRAF4-206ENST00000454852 INE1O15225 51 aa3.39□□□□□ -1.87
TRAF4-206ENST00000454852 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
TRAF4-206ENST00000454852 HMCN1Q96RW7 5635 aa3.37□□□□□ -1.87
TRAF4-206ENST00000454852 KRTAP6-1Q3LI64 71 aa3.37□□□□□ -1.87
TRAF4-206ENST00000454852 MT4P47944 62 aa3.36□□□□□ -1.87
TRAF4-206ENST00000454852 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
TRAF4-206ENST00000454852 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.87
TRAF4-206ENST00000454852 GPR98Q8WXG9 6306 aa3.32□□□□□ -1.88
TRAF4-206ENST00000454852 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
TRAF4-206ENST00000454852 KRTAP9-4Q9BYQ2 154 aa3.29□□□□□ -1.88
TRAF4-206ENST00000454852 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.9
TRAF4-206ENST00000454852 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
TRAF4-206ENST00000454852 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
TRAF4-206ENST00000454852 MT3P25713 68 aa3.13□□□□□ -1.91
TRAF4-206ENST00000454852 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
TRAF4-206ENST00000454852 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
TRAF4-206ENST00000454852 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
TRAF4-206ENST00000454852 KRTAP4-11Q9BYQ6 195 aa2.92□□□□□ -1.94
TRAF4-206ENST00000454852 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
TRAF4-206ENST00000454852 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
TRAF4-206ENST00000454852 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
TRAF4-206ENST00000454852 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
TRAF4-206ENST00000454852 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
TRAF4-206ENST00000454852 MUC5ACP98088 5654 aa2.74□□□□□ -1.97
TRAF4-206ENST00000454852 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
TRAF4-206ENST00000454852 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
TRAF4-206ENST00000454852 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
TRAF4-206ENST00000454852 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
TRAF4-206ENST00000454852 KRTAP9-9Q9BYP9 154 aa2.58□□□□□ -2
TRAF4-206ENST00000454852 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
TRAF4-206ENST00000454852 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
TRAF4-206ENST00000454852 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.02
TRAF4-206ENST00000454852 PRM1P04553 51 aa2.36□□□□□ -2.03
TRAF4-206ENST00000454852 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
TRAF4-206ENST00000454852 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
TRAF4-206ENST00000454852 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
TRAF4-206ENST00000454852 KRTAP4-12Q9BQ66 201 aa2.14□□□□□ -2.07
TRAF4-206ENST00000454852 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
TRAF4-206ENST00000454852 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
TRAF4-206ENST00000454852 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
TRAF4-206ENST00000454852 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
TRAF4-206ENST00000454852 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 77.2 ms