RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
NCKIPSD-207ENST00000453349 KRTAP2-3P0C7H8 128 aa5.29□□□□□ -1.56
NCKIPSD-207ENST00000453349 BRK1Q8WUW1 75 aa5.29□□□□□ -1.56
NCKIPSD-207ENST00000453349 KRTAP2-4Q9BYR9 128 aa5.29□□□□□ -1.56
NCKIPSD-207ENST00000453349 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
NCKIPSD-207ENST00000453349 LCE5AQ5TCM9 118 aa5.25□□□□□ -1.57
NCKIPSD-207ENST00000453349 MT1GP13640 62 aa5.23□□□□□ -1.57
NCKIPSD-207ENST00000453349 PP632Q6XCG6 107 aa5.21□□□□□ -1.58
NCKIPSD-207ENST00000453349 MT1LQ93083 61 aa5.21□□□□□ -1.58
NCKIPSD-207ENST00000453349 LCE3BQ5TA77 95 aa5.17□□□□□ -1.58
NCKIPSD-207ENST00000453349 KRTAP2-2Q9BYT5 123 aa5.15□□□□□ -1.59
NCKIPSD-207ENST00000453349 KRTAP2-1Q9BYU5 128 aa5.15□□□□□ -1.59
NCKIPSD-207ENST00000453349 MT1MQ8N339 61 aa5.11□□□□□ -1.59
NCKIPSD-207ENST00000453349 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
NCKIPSD-207ENST00000453349 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
NCKIPSD-207ENST00000453349 PMAIP1Q13794 54 aa5.01□□□□□ -1.61
NCKIPSD-207ENST00000453349 KRTAP4-7Q9BYR0 210 aa4.97□□□□□ -1.61
NCKIPSD-207ENST00000453349 KRTAP4-3Q9BYR4 195 aa4.97□□□□□ -1.61
NCKIPSD-207ENST00000453349 PRO0628Q9UI54 55 aa4.9□□□□□ -1.63
NCKIPSD-207ENST00000453349 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
NCKIPSD-207ENST00000453349 H3BS24 57 aa4.87□□□□□ -1.63
NCKIPSD-207ENST00000453349 DSTQ03001 7570 aaKnown RBP4.87□□□□□ -1.63
NCKIPSD-207ENST00000453349 GPR98Q8WXG9 6306 aa4.85□□□□□ -1.63
NCKIPSD-207ENST00000453349 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
NCKIPSD-207ENST00000453349 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.66
NCKIPSD-207ENST00000453349 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
NCKIPSD-207ENST00000453349 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
NCKIPSD-207ENST00000453349 KRTAP5-4Q6L8H1 288 aa4.68□□□□□ -1.66
NCKIPSD-207ENST00000453349 MT4P47944 62 aa4.64□□□□□ -1.67
NCKIPSD-207ENST00000453349 LCE1DQ5T752 114 aa4.63□□□□□ -1.67
NCKIPSD-207ENST00000453349 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
NCKIPSD-207ENST00000453349 KTN1-AS1Q86SY8 53 aa4.6□□□□□ -1.67
NCKIPSD-207ENST00000453349 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
NCKIPSD-207ENST00000453349 KRTAP4-6Q9BYQ5 205 aa4.52□□□□□ -1.69
NCKIPSD-207ENST00000453349 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
NCKIPSD-207ENST00000453349 MT1AP04731 61 aa4.44□□□□□ -1.7
NCKIPSD-207ENST00000453349 SPRR5A0A1B0GTR4 108 aa4.43□□□□□ -1.7
NCKIPSD-207ENST00000453349 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.71
NCKIPSD-207ENST00000453349 KRTAP6-1Q3LI64 71 aa4.39□□□□□ -1.71
NCKIPSD-207ENST00000453349 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
NCKIPSD-207ENST00000453349 KRTAP9-4Q9BYQ2 154 aa4.29□□□□□ -1.72
NCKIPSD-207ENST00000453349 AHNAK2Q8IVF2 5795 aa4.28□□□□□ -1.72
NCKIPSD-207ENST00000453349 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
NCKIPSD-207ENST00000453349 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
NCKIPSD-207ENST00000453349 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
NCKIPSD-207ENST00000453349 KRTAP5-2Q701N4 177 aa4.14□□□□□ -1.75
NCKIPSD-207ENST00000453349 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
NCKIPSD-207ENST00000453349 MT3P25713 68 aa4.08□□□□□ -1.76
NCKIPSD-207ENST00000453349 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
NCKIPSD-207ENST00000453349 LUZP6Q538Z0 58 aa4□□□□□ -1.77
NCKIPSD-207ENST00000453349 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
NCKIPSD-207ENST00000453349 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
NCKIPSD-207ENST00000453349 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
NCKIPSD-207ENST00000453349 AHNAKQ09666 5890 aaKnown RBP3.71□□□□□ -1.82
NCKIPSD-207ENST00000453349 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
NCKIPSD-207ENST00000453349 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
NCKIPSD-207ENST00000453349 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
NCKIPSD-207ENST00000453349 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
NCKIPSD-207ENST00000453349 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
NCKIPSD-207ENST00000453349 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.83
NCKIPSD-207ENST00000453349 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
NCKIPSD-207ENST00000453349 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
NCKIPSD-207ENST00000453349 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
NCKIPSD-207ENST00000453349 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
NCKIPSD-207ENST00000453349 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
NCKIPSD-207ENST00000453349 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
NCKIPSD-207ENST00000453349 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
NCKIPSD-207ENST00000453349 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
NCKIPSD-207ENST00000453349 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
NCKIPSD-207ENST00000453349 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
NCKIPSD-207ENST00000453349 INE1O15225 51 aa2.88□□□□□ -1.95
NCKIPSD-207ENST00000453349 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
NCKIPSD-207ENST00000453349 PRM1P04553 51 aa2.75□□□□□ -1.97
NCKIPSD-207ENST00000453349 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
NCKIPSD-207ENST00000453349 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
NCKIPSD-207ENST00000453349 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
NCKIPSD-207ENST00000453349 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
NCKIPSD-207ENST00000453349 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 281.5 ms