RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 SERP1Q9Y6X1 66 aa4.86□□□□□ -1.63
LYSMD3-202ENST00000453259 KRTAP20-2Q3LI61 65 aa4.85□□□□□ -1.63
LYSMD3-202ENST00000453259 C10orf95Q9H7T3 257 aa4.85□□□□□ -1.63
LYSMD3-202ENST00000453259 KRTAP12-1P59990 96 aa4.84□□□□□ -1.63
LYSMD3-202ENST00000453259 SPATA8Q6RVD6 105 aa4.81□□□□□ -1.64
LYSMD3-202ENST00000453259 SNURFQ9Y675 71 aa4.8□□□□□ -1.64
LYSMD3-202ENST00000453259 A0A1B0GU33 70 aa4.79□□□□□ -1.64
LYSMD3-202ENST00000453259 LCE3AQ5TA76 89 aa4.79□□□□□ -1.64
LYSMD3-202ENST00000453259 A0A1B0GV90 55 aa4.78□□□□□ -1.64
LYSMD3-202ENST00000453259 TNP1P09430 55 aa4.77□□□□□ -1.65
LYSMD3-202ENST00000453259 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
LYSMD3-202ENST00000453259 KRTAP5-5Q701N2 237 aaPredicted RBP4.75□□□□□ -1.65
LYSMD3-202ENST00000453259 COA5Q86WW8 74 aa4.73□□□□□ -1.65
LYSMD3-202ENST00000453259 SMIM26A0A096LP01 95 aa4.7□□□□□ -1.66
LYSMD3-202ENST00000453259 KRTAP12-3P60328 96 aa4.66□□□□□ -1.66
LYSMD3-202ENST00000453259 SERP2Q8N6R1 65 aa4.61□□□□□ -1.67
LYSMD3-202ENST00000453259 SVIPQ8NHG7 77 aa4.54□□□□□ -1.68
LYSMD3-202ENST00000453259 A0A1B0GU69 56 aa4.53□□□□□ -1.68
LYSMD3-202ENST00000453259 A8MU10 97 aa4.53□□□□□ -1.68
LYSMD3-202ENST00000453259 K7ERU9 68 aa4.53□□□□□ -1.68
LYSMD3-202ENST00000453259 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
LYSMD3-202ENST00000453259 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.69
LYSMD3-202ENST00000453259 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
LYSMD3-202ENST00000453259 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
LYSMD3-202ENST00000453259 KRTAP5-8O75690 187 aa4.38□□□□□ -1.71
LYSMD3-202ENST00000453259 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
LYSMD3-202ENST00000453259 PCP4P48539 62 aa4.37□□□□□ -1.71
LYSMD3-202ENST00000453259 H7BZZ5 65 aa4.36□□□□□ -1.71
LYSMD3-202ENST00000453259 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
LYSMD3-202ENST00000453259 PRR15LQ9BU68 103 aa4.34□□□□□ -1.71
LYSMD3-202ENST00000453259 MUC5BQ9HC84 5762 aaPredicted RBP4.33□□□□□ -1.72
LYSMD3-202ENST00000453259 COX7CP15954 63 aa4.33□□□□□ -1.72
LYSMD3-202ENST00000453259 MT1AP04731 61 aa4.31□□□□□ -1.72
LYSMD3-202ENST00000453259 KRTAP6-1Q3LI64 71 aa4.25□□□□□ -1.73
LYSMD3-202ENST00000453259 LCE3CQ5T5A8 94 aa4.25□□□□□ -1.73
LYSMD3-202ENST00000453259 MT3P25713 68 aa4.2□□□□□ -1.74
LYSMD3-202ENST00000453259 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
LYSMD3-202ENST00000453259 UQCR11O14957 56 aa4.16□□□□□ -1.74
LYSMD3-202ENST00000453259 KRTAP5-11Q6L8G4 156 aa4.16□□□□□ -1.74
LYSMD3-202ENST00000453259 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
LYSMD3-202ENST00000453259 LINC01558Q9Y6Z2 57 aa4.14□□□□□ -1.75
LYSMD3-202ENST00000453259 ANAPC13Q9BS18 74 aa4.09□□□□□ -1.75
LYSMD3-202ENST00000453259 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
LYSMD3-202ENST00000453259 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
LYSMD3-202ENST00000453259 K7ERS5 55 aa4.07□□□□□ -1.76
LYSMD3-202ENST00000453259 ATP5EP56381 51 aaPredicted RBP4.07□□□□□ -1.76
LYSMD3-202ENST00000453259 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
LYSMD3-202ENST00000453259 MIR22HGQ0VDD5 57 aa3.99□□□□□ -1.77
LYSMD3-202ENST00000453259 CCDC179H3BU77 68 aa3.98□□□□□ -1.77
LYSMD3-202ENST00000453259 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
LYSMD3-202ENST00000453259 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
LYSMD3-202ENST00000453259 TMEM258P61165 79 aa3.88□□□□□ -1.79
LYSMD3-202ENST00000453259 RPS28P62857 69 aaKnown RBP3.84□□□□□ -1.79
LYSMD3-202ENST00000453259 CDC42SE1Q9NRR8 79 aa3.76□□□□□ -1.81
LYSMD3-202ENST00000453259 Q1T7F1 81 aa3.71□□□□□ -1.82
LYSMD3-202ENST00000453259 V9GYY9 64 aa3.7□□□□□ -1.82
LYSMD3-202ENST00000453259 ROMO1P60602 79 aa3.65□□□□□ -1.83
LYSMD3-202ENST00000453259 PSPHP1O15172 72 aa3.63□□□□□ -1.83
LYSMD3-202ENST00000453259 PRAC1Q96KF2 57 aa3.57□□□□□ -1.84
LYSMD3-202ENST00000453259 A6NED7 52 aa3.53□□□□□ -1.84
LYSMD3-202ENST00000453259 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
LYSMD3-202ENST00000453259 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
LYSMD3-202ENST00000453259 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
LYSMD3-202ENST00000453259 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
LYSMD3-202ENST00000453259 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
LYSMD3-202ENST00000453259 BRK1Q8WUW1 75 aa3.09□□□□□ -1.91
LYSMD3-202ENST00000453259 PHGR1C9JFL3 82 aa3.04□□□□□ -1.92
LYSMD3-202ENST00000453259 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
LYSMD3-202ENST00000453259 PMAIP1Q13794 54 aa2.9□□□□□ -1.95
LYSMD3-202ENST00000453259 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
LYSMD3-202ENST00000453259 PRO0628Q9UI54 55 aa2.76□□□□□ -1.97
LYSMD3-202ENST00000453259 KTN1-AS1Q86SY8 53 aa2.64□□□□□ -1.99
LYSMD3-202ENST00000453259 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
LYSMD3-202ENST00000453259 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
LYSMD3-202ENST00000453259 LUZP6Q538Z0 58 aa2.35□□□□□ -2.03
LYSMD3-202ENST00000453259 PRM1P04553 51 aa1.8□□□□□ -2.12
LYSMD3-202ENST00000453259 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
LYSMD3-202ENST00000453259 INE1O15225 51 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 61 ms