RNA–Protein interactions for RNA: ENST00000453135.1

LINC01647-201, Transcript of long intergenic non-protein coding RNA 1647, humanhuman

TSL 1 (best) BASIC

Gene LINC01647, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01647-201ENST00000453135 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
LINC01647-201ENST00000453135 PRO0628Q9UI54 55 aa3.5□□□□□ -1.85
LINC01647-201ENST00000453135 KMT2DO14686 5537 aa3.48□□□□□ -1.85
LINC01647-201ENST00000453135 A6NED7 52 aa3.43□□□□□ -1.86
LINC01647-201ENST00000453135 KRTAP8-1Q8IUC2 63 aa3.43□□□□□ -1.86
LINC01647-201ENST00000453135 MUC12Q9UKN1 5478 aa3.41□□□□□ -1.86
LINC01647-201ENST00000453135 K7ERS5 55 aa3.41□□□□□ -1.86
LINC01647-201ENST00000453135 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
LINC01647-201ENST00000453135 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
LINC01647-201ENST00000453135 C10orf95Q9H7T3 257 aa3.38□□□□□ -1.87
LINC01647-201ENST00000453135 MDN1Q9NU22 5596 aa3.37□□□□□ -1.87
LINC01647-201ENST00000453135 SPRR2FQ96RM1 72 aa3.37□□□□□ -1.87
LINC01647-201ENST00000453135 TNP1P09430 55 aa3.35□□□□□ -1.87
LINC01647-201ENST00000453135 CDC42SE1Q9NRR8 79 aa3.32□□□□□ -1.88
LINC01647-201ENST00000453135 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
LINC01647-201ENST00000453135 NEBP20929 6669 aa3.3□□□□□ -1.88
LINC01647-201ENST00000453135 BRK1Q8WUW1 75 aa3.29□□□□□ -1.88
LINC01647-201ENST00000453135 SPRR2EP22531 72 aa3.27□□□□□ -1.89
LINC01647-201ENST00000453135 SPRR2BP35325 72 aa3.27□□□□□ -1.89
LINC01647-201ENST00000453135 SPRR2AP35326 72 aa3.27□□□□□ -1.89
LINC01647-201ENST00000453135 PMAIP1Q13794 54 aa3.26□□□□□ -1.89
LINC01647-201ENST00000453135 KRTAP25-1Q3LHN0 102 aa3.26□□□□□ -1.89
LINC01647-201ENST00000453135 KRTAP19-7Q3SYF9 63 aa3.25□□□□□ -1.89
LINC01647-201ENST00000453135 LCE3AQ5TA76 89 aa3.25□□□□□ -1.89
LINC01647-201ENST00000453135 KRTAP19-5Q3LI72 72 aa3.23□□□□□ -1.89
LINC01647-201ENST00000453135 MT1EP04732 61 aa3.22□□□□□ -1.89
LINC01647-201ENST00000453135 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
LINC01647-201ENST00000453135 ROMO1P60602 79 aa3.2□□□□□ -1.9
LINC01647-201ENST00000453135 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
LINC01647-201ENST00000453135 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
LINC01647-201ENST00000453135 KTN1-AS1Q86SY8 53 aa3.18□□□□□ -1.9
LINC01647-201ENST00000453135 SPRR2DP22532 72 aa3.17□□□□□ -1.9
LINC01647-201ENST00000453135 KRTAP19-3Q7Z4W3 81 aa3.15□□□□□ -1.91
LINC01647-201ENST00000453135 KRTAP2-3P0C7H8 128 aa3.13□□□□□ -1.91
LINC01647-201ENST00000453135 KRTAP12-3P60328 96 aa3.13□□□□□ -1.91
LINC01647-201ENST00000453135 KRTAP2-4Q9BYR9 128 aa3.13□□□□□ -1.91
LINC01647-201ENST00000453135 MT1GP13640 62 aa3.11□□□□□ -1.91
LINC01647-201ENST00000453135 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
LINC01647-201ENST00000453135 MT1LQ93083 61 aa3.11□□□□□ -1.91
LINC01647-201ENST00000453135 PP632Q6XCG6 107 aa3.08□□□□□ -1.92
LINC01647-201ENST00000453135 MT1MQ8N339 61 aa3.05□□□□□ -1.92
LINC01647-201ENST00000453135 KRTAP2-1Q9BYU5 128 aa3.05□□□□□ -1.92
LINC01647-201ENST00000453135 DSTQ03001 7570 aaKnown RBP3.01□□□□□ -1.93
LINC01647-201ENST00000453135 KRTAP4-3Q9BYR4 195 aa2.96□□□□□ -1.94
LINC01647-201ENST00000453135 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
LINC01647-201ENST00000453135 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
LINC01647-201ENST00000453135 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
LINC01647-201ENST00000453135 KRTAP5-5Q701N2 237 aaPredicted RBP2.76□□□□□ -1.97
LINC01647-201ENST00000453135 MT4P47944 62 aa2.75□□□□□ -1.97
LINC01647-201ENST00000453135 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
LINC01647-201ENST00000453135 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
LINC01647-201ENST00000453135 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
LINC01647-201ENST00000453135 KRTAP12-4P60329 112 aa2.67□□□□□ -1.98
LINC01647-201ENST00000453135 MT1AP04731 61 aa2.65□□□□□ -1.99
LINC01647-201ENST00000453135 SPRR5A0A1B0GTR4 108 aa2.63□□□□□ -1.99
LINC01647-201ENST00000453135 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
LINC01647-201ENST00000453135 KRTAP6-1Q3LI64 71 aa2.62□□□□□ -1.99
LINC01647-201ENST00000453135 OBSCNQ5VST9 7968 aa2.56□□□□□ -2
LINC01647-201ENST00000453135 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
LINC01647-201ENST00000453135 KRTAP5-10Q6L8G5 202 aa2.53□□□□□ -2
LINC01647-201ENST00000453135 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
LINC01647-201ENST00000453135 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
LINC01647-201ENST00000453135 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
LINC01647-201ENST00000453135 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
LINC01647-201ENST00000453135 LUZP6Q538Z0 58 aa2.38□□□□□ -2.03
LINC01647-201ENST00000453135 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
LINC01647-201ENST00000453135 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
LINC01647-201ENST00000453135 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
LINC01647-201ENST00000453135 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
LINC01647-201ENST00000453135 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
LINC01647-201ENST00000453135 INE1O15225 51 aa2.14□□□□□ -2.07
LINC01647-201ENST00000453135 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
LINC01647-201ENST00000453135 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
LINC01647-201ENST00000453135 PRM1P04553 51 aa1.65□□□□□ -2.15
LINC01647-201ENST00000453135 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
LINC01647-201ENST00000453135 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
LINC01647-201ENST00000453135 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 9.5 ms