RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 KRTAP25-1Q3LHN0 102 aa4.69□□□□□ -1.66
CPSF4-208ENST00000452047 A0A0D9SG42 100 aa4.68□□□□□ -1.66
CPSF4-208ENST00000452047 ROMO1P60602 79 aa4.68□□□□□ -1.66
CPSF4-208ENST00000452047 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
CPSF4-208ENST00000452047 MT1EP04732 61 aa4.66□□□□□ -1.66
CPSF4-208ENST00000452047 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
CPSF4-208ENST00000452047 KRTAP12-1P59990 96 aa4.62□□□□□ -1.67
CPSF4-208ENST00000452047 SPINT4Q6UDR6 99 aa4.61□□□□□ -1.67
CPSF4-208ENST00000452047 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
CPSF4-208ENST00000452047 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
CPSF4-208ENST00000452047 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
CPSF4-208ENST00000452047 MT1GP13640 62 aa4.51□□□□□ -1.69
CPSF4-208ENST00000452047 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
CPSF4-208ENST00000452047 MT1MQ8N339 61 aa4.44□□□□□ -1.7
CPSF4-208ENST00000452047 MT1LQ93083 61 aa4.44□□□□□ -1.7
CPSF4-208ENST00000452047 LCE3AQ5TA76 89 aa4.42□□□□□ -1.7
CPSF4-208ENST00000452047 C10orf95Q9H7T3 257 aa4.42□□□□□ -1.7
CPSF4-208ENST00000452047 TNP1P09430 55 aa4.39□□□□□ -1.71
CPSF4-208ENST00000452047 LCE1DQ5T752 114 aa4.38□□□□□ -1.71
CPSF4-208ENST00000452047 LCE4AQ5TA78 99 aa4.35□□□□□ -1.71
CPSF4-208ENST00000452047 KRTAP4-3Q9BYR4 195 aa4.34□□□□□ -1.71
CPSF4-208ENST00000452047 HMCN1Q96RW7 5635 aa4.32□□□□□ -1.72
CPSF4-208ENST00000452047 MT4P47944 62 aa4.32□□□□□ -1.72
CPSF4-208ENST00000452047 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
CPSF4-208ENST00000452047 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
CPSF4-208ENST00000452047 KRTAP15-1Q3LI76 137 aa4.24□□□□□ -1.73
CPSF4-208ENST00000452047 AHNAK2Q8IVF2 5795 aa4.23□□□□□ -1.73
CPSF4-208ENST00000452047 KRTAP5-10Q6L8G5 202 aa4.22□□□□□ -1.73
CPSF4-208ENST00000452047 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
CPSF4-208ENST00000452047 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
CPSF4-208ENST00000452047 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
CPSF4-208ENST00000452047 H3BS24 57 aa4.14□□□□□ -1.75
CPSF4-208ENST00000452047 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
CPSF4-208ENST00000452047 KRTAP5-7Q6L8G8 165 aa4.08□□□□□ -1.76
CPSF4-208ENST00000452047 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
CPSF4-208ENST00000452047 KRTAP5-3Q6L8H2 238 aa4.05□□□□□ -1.76
CPSF4-208ENST00000452047 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
CPSF4-208ENST00000452047 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
CPSF4-208ENST00000452047 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
CPSF4-208ENST00000452047 LOC100996750A0A140TA64 210 aa4□□□□□ -1.77
CPSF4-208ENST00000452047 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
CPSF4-208ENST00000452047 LUZP6Q538Z0 58 aa3.94□□□□□ -1.78
CPSF4-208ENST00000452047 SYNE1Q8NF91 8797 aaKnown RBP3.93□□□□□ -1.78
CPSF4-208ENST00000452047 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.79
CPSF4-208ENST00000452047 MT1AP04731 61 aa3.78□□□□□ -1.8
CPSF4-208ENST00000452047 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
CPSF4-208ENST00000452047 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
CPSF4-208ENST00000452047 A0A0A0MQY5 61 aa3.72□□□□□ -1.81
CPSF4-208ENST00000452047 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
CPSF4-208ENST00000452047 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
CPSF4-208ENST00000452047 KRTAP9-4Q9BYQ2 154 aa3.65□□□□□ -1.83
CPSF4-208ENST00000452047 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
CPSF4-208ENST00000452047 KRTAP5-8O75690 187 aa3.59□□□□□ -1.83
CPSF4-208ENST00000452047 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.84
CPSF4-208ENST00000452047 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
CPSF4-208ENST00000452047 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
CPSF4-208ENST00000452047 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
CPSF4-208ENST00000452047 INE1O15225 51 aa3.44□□□□□ -1.86
CPSF4-208ENST00000452047 MT3P25713 68 aa3.44□□□□□ -1.86
CPSF4-208ENST00000452047 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
CPSF4-208ENST00000452047 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
CPSF4-208ENST00000452047 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
CPSF4-208ENST00000452047 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
CPSF4-208ENST00000452047 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
CPSF4-208ENST00000452047 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
CPSF4-208ENST00000452047 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
CPSF4-208ENST00000452047 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
CPSF4-208ENST00000452047 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
CPSF4-208ENST00000452047 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
CPSF4-208ENST00000452047 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
CPSF4-208ENST00000452047 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
CPSF4-208ENST00000452047 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
CPSF4-208ENST00000452047 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
CPSF4-208ENST00000452047 PRM1P04553 51 aa2.43□□□□□ -2.02
CPSF4-208ENST00000452047 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
CPSF4-208ENST00000452047 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
CPSF4-208ENST00000452047 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
CPSF4-208ENST00000452047 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 534.3 ms