RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 KRTAP25-1Q3LHN0 102 aa8.48□□□□□ -1.05
C9orf3-208ENST00000451893 TNP1P09430 55 aa8.43□□□□□ -1.06
C9orf3-208ENST00000451893 LCE3BQ5TA77 95 aa8.38□□□□□ -1.07
C9orf3-208ENST00000451893 KRTAP23-1A1A580 65 aa8.27□□□□□ -1.09
C9orf3-208ENST00000451893 PRAC1Q96KF2 57 aa8.27□□□□□ -1.09
C9orf3-208ENST00000451893 SVIPQ8NHG7 77 aa8.24□□□□□ -1.09
C9orf3-208ENST00000451893 PP632Q6XCG6 107 aa8.22□□□□□ -1.09
C9orf3-208ENST00000451893 KRTAP19-7Q3SYF9 63 aa8.05□□□□□ -1.12
C9orf3-208ENST00000451893 MT1EP04732 61 aa8.03□□□□□ -1.12
C9orf3-208ENST00000451893 KRTAP19-3Q7Z4W3 81 aa8.02□□□□□ -1.13
C9orf3-208ENST00000451893 LCE5AQ5TCM9 118 aa8.01□□□□□ -1.13
C9orf3-208ENST00000451893 LCE3AQ5TA76 89 aa7.97□□□□□ -1.13
C9orf3-208ENST00000451893 KRTAP19-5Q3LI72 72 aa7.9□□□□□ -1.14
C9orf3-208ENST00000451893 DSTQ03001 7570 aaKnown RBP7.9□□□□□ -1.15
C9orf3-208ENST00000451893 MT1GP13640 62 aa7.82□□□□□ -1.16
C9orf3-208ENST00000451893 KRTAP4-9Q9BYQ8 210 aa7.8□□□□□ -1.16
C9orf3-208ENST00000451893 KRTAP12-3P60328 96 aa7.72□□□□□ -1.17
C9orf3-208ENST00000451893 MT1MQ8N339 61 aa7.67□□□□□ -1.18
C9orf3-208ENST00000451893 MT1LQ93083 61 aa7.66□□□□□ -1.18
C9orf3-208ENST00000451893 LCE1DQ5T752 114 aa7.59□□□□□ -1.19
C9orf3-208ENST00000451893 GPR98Q8WXG9 6306 aa7.59□□□□□ -1.19
C9orf3-208ENST00000451893 KRTAP15-1Q3LI76 137 aa7.58□□□□□ -1.2
C9orf3-208ENST00000451893 LCE4AQ5TA78 99 aa7.58□□□□□ -1.2
C9orf3-208ENST00000451893 MT4P47944 62 aa7.56□□□□□ -1.2
C9orf3-208ENST00000451893 KRTAP19-4Q3LI73 84 aa7.5□□□□□ -1.21
C9orf3-208ENST00000451893 KRTAP4-3Q9BYR4 195 aa7.47□□□□□ -1.21
C9orf3-208ENST00000451893 HMCN1Q96RW7 5635 aa7.37□□□□□ -1.23
C9orf3-208ENST00000451893 KRTAP5-4Q6L8H1 288 aa7.3□□□□□ -1.24
C9orf3-208ENST00000451893 KRTAP4-7Q9BYR0 210 aa7.27□□□□□ -1.25
C9orf3-208ENST00000451893 KRTAP4-6Q9BYQ5 205 aa7.23□□□□□ -1.25
C9orf3-208ENST00000451893 LCE3CQ5T5A8 94 aa7.22□□□□□ -1.25
C9orf3-208ENST00000451893 SPRR5A0A1B0GTR4 108 aa7.16□□□□□ -1.26
C9orf3-208ENST00000451893 AHNAK2Q8IVF2 5795 aa7.15□□□□□ -1.26
C9orf3-208ENST00000451893 LOC100996750A0A140TA64 210 aa7.15□□□□□ -1.26
C9orf3-208ENST00000451893 KRTAP5-10Q6L8G5 202 aa7.05□□□□□ -1.28
C9orf3-208ENST00000451893 H3BS24 57 aa7.03□□□□□ -1.28
C9orf3-208ENST00000451893 KRTAP12-4P60329 112 aa6.99□□□□□ -1.29
C9orf3-208ENST00000451893 KRTAP20-2Q3LI61 65 aa6.97□□□□□ -1.29
C9orf3-208ENST00000451893 KRTAP5-5Q701N2 237 aaPredicted RBP6.95□□□□□ -1.3
C9orf3-208ENST00000451893 LUZP6Q538Z0 58 aa6.94□□□□□ -1.3
C9orf3-208ENST00000451893 KRTAP5-3Q6L8H2 238 aa6.91□□□□□ -1.3
C9orf3-208ENST00000451893 KRTAP5-7Q6L8G8 165 aa6.81□□□□□ -1.32
C9orf3-208ENST00000451893 KRTAP9-6A8MVA2 160 aa6.71□□□□□ -1.34
C9orf3-208ENST00000451893 SYNE1Q8NF91 8797 aaKnown RBP6.7□□□□□ -1.34
C9orf3-208ENST00000451893 NDUFAF8A1L188 74 aa6.57□□□□□ -1.36
C9orf3-208ENST00000451893 MT1AP04731 61 aa6.53□□□□□ -1.36
C9orf3-208ENST00000451893 KRTAP4-12Q9BQ66 201 aa6.53□□□□□ -1.36
C9orf3-208ENST00000451893 KRTAP6-1Q3LI64 71 aa6.48□□□□□ -1.37
C9orf3-208ENST00000451893 KRTAP4-11Q9BYQ6 195 aa6.4□□□□□ -1.38
C9orf3-208ENST00000451893 KRTAP5-2Q701N4 177 aa6.37□□□□□ -1.39
C9orf3-208ENST00000451893 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
C9orf3-208ENST00000451893 KRTAP6-2Q3LI66 62 aa6.24□□□□□ -1.41
C9orf3-208ENST00000451893 KRTAP9-9Q9BYP9 154 aa6.21□□□□□ -1.42
C9orf3-208ENST00000451893 KRTAP5-8O75690 187 aa6.14□□□□□ -1.43
C9orf3-208ENST00000451893 MT3P25713 68 aa6.03□□□□□ -1.44
C9orf3-208ENST00000451893 OBSCNQ5VST9 7968 aa6□□□□□ -1.45
C9orf3-208ENST00000451893 MUC5BQ9HC84 5762 aaPredicted RBP5.9□□□□□ -1.47
C9orf3-208ENST00000451893 A0A0A0MQY5 61 aa5.89□□□□□ -1.47
C9orf3-208ENST00000451893 AHNAKQ09666 5890 aaKnown RBP5.88□□□□□ -1.47
C9orf3-208ENST00000451893 MUC5ACP98088 5654 aa5.87□□□□□ -1.47
C9orf3-208ENST00000451893 KRTAP5-1Q6L8H4 278 aa5.74□□□□□ -1.49
C9orf3-208ENST00000451893 INE1O15225 51 aa5.58□□□□□ -1.52
C9orf3-208ENST00000451893 KRTAP4-2Q9BYR5 136 aa5.57□□□□□ -1.52
C9orf3-208ENST00000451893 LCE1EQ5T753 118 aa5.49□□□□□ -1.53
C9orf3-208ENST00000451893 LCE3DQ9BYE3 92 aa5.42□□□□□ -1.54
C9orf3-208ENST00000451893 LCE1BQ5T7P3 118 aa5.3□□□□□ -1.56
C9orf3-208ENST00000451893 LCE3EQ5T5B0 92 aa5.27□□□□□ -1.57
C9orf3-208ENST00000451893 LCE1CQ5T751 118 aa5.1□□□□□ -1.59
C9orf3-208ENST00000451893 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
C9orf3-208ENST00000451893 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.58□□□□□ -1.68
C9orf3-208ENST00000451893 LCE1FQ5T754 118 aa4.54□□□□□ -1.68
C9orf3-208ENST00000451893 PRM1P04553 51 aa4.48□□□□□ -1.69
C9orf3-208ENST00000451893 KRTAP21-2Q3LI59 83 aa4.22□□□□□ -1.73
C9orf3-208ENST00000451893 PHGR1C9JFL3 82 aa4.21□□□□□ -1.74
C9orf3-208ENST00000451893 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
C9orf3-208ENST00000451893 MUC19Q7Z5P9 8384 aa3.69□□□□□ -1.82
C9orf3-208ENST00000451893 KRTAP21-1Q3LI58 79 aa3.19□□□□□ -1.9
C9orf3-208ENST00000451893 MUC16Q8WXI7 14507 aa2.61□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 29 ms