RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 KRTAP19-5Q3LI72 72 aa4.43□□□□□ -1.7
SMPD4-212ENST00000451542 KRTAP19-3Q7Z4W3 81 aa4.42□□□□□ -1.7
SMPD4-212ENST00000451542 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
SMPD4-212ENST00000451542 LCE3BQ5TA77 95 aa4.41□□□□□ -1.7
SMPD4-212ENST00000451542 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.71
SMPD4-212ENST00000451542 LCE5AQ5TCM9 118 aa4.38□□□□□ -1.71
SMPD4-212ENST00000451542 PP632Q6XCG6 107 aa4.38□□□□□ -1.71
SMPD4-212ENST00000451542 MT1GP13640 62 aa4.36□□□□□ -1.71
SMPD4-212ENST00000451542 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.71
SMPD4-212ENST00000451542 CDC42SE1Q9NRR8 79 aa4.3□□□□□ -1.72
SMPD4-212ENST00000451542 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
SMPD4-212ENST00000451542 MT1LQ93083 61 aa4.28□□□□□ -1.72
SMPD4-212ENST00000451542 MT1MQ8N339 61 aa4.23□□□□□ -1.73
SMPD4-212ENST00000451542 ROMO1P60602 79 aa4.22□□□□□ -1.73
SMPD4-212ENST00000451542 DSTQ03001 7570 aaKnown RBP4.15□□□□□ -1.75
SMPD4-212ENST00000451542 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
SMPD4-212ENST00000451542 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
SMPD4-212ENST00000451542 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
SMPD4-212ENST00000451542 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
SMPD4-212ENST00000451542 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
SMPD4-212ENST00000451542 KRTAP4-9Q9BYQ8 210 aa4.01□□□□□ -1.77
SMPD4-212ENST00000451542 BRK1Q8WUW1 75 aa3.99□□□□□ -1.77
SMPD4-212ENST00000451542 LOC100996750A0A140TA64 210 aa3.97□□□□□ -1.77
SMPD4-212ENST00000451542 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
SMPD4-212ENST00000451542 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
SMPD4-212ENST00000451542 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
SMPD4-212ENST00000451542 MT4P47944 62 aa3.94□□□□□ -1.78
SMPD4-212ENST00000451542 KRTAP5-4Q6L8H1 288 aa3.94□□□□□ -1.78
SMPD4-212ENST00000451542 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
SMPD4-212ENST00000451542 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
SMPD4-212ENST00000451542 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
SMPD4-212ENST00000451542 PMAIP1Q13794 54 aa3.78□□□□□ -1.8
SMPD4-212ENST00000451542 SPRR5A0A1B0GTR4 108 aa3.76□□□□□ -1.81
SMPD4-212ENST00000451542 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
SMPD4-212ENST00000451542 HMCN1Q96RW7 5635 aa3.75□□□□□ -1.81
SMPD4-212ENST00000451542 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
SMPD4-212ENST00000451542 MT1AP04731 61 aa3.67□□□□□ -1.82
SMPD4-212ENST00000451542 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
SMPD4-212ENST00000451542 KRTAP9-4Q9BYQ2 154 aa3.61□□□□□ -1.83
SMPD4-212ENST00000451542 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
SMPD4-212ENST00000451542 PRO0628Q9UI54 55 aa3.6□□□□□ -1.83
SMPD4-212ENST00000451542 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
SMPD4-212ENST00000451542 KRTAP5-3Q6L8H2 238 aa3.58□□□□□ -1.84
SMPD4-212ENST00000451542 AHNAK2Q8IVF2 5795 aa3.58□□□□□ -1.84
SMPD4-212ENST00000451542 KRTAP5-10Q6L8G5 202 aa3.57□□□□□ -1.84
SMPD4-212ENST00000451542 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
SMPD4-212ENST00000451542 PRAC1Q96KF2 57 aa3.52□□□□□ -1.85
SMPD4-212ENST00000451542 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
SMPD4-212ENST00000451542 KRTAP5-7Q6L8G8 165 aa3.44□□□□□ -1.86
SMPD4-212ENST00000451542 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
SMPD4-212ENST00000451542 KTN1-AS1Q86SY8 53 aa3.42□□□□□ -1.86
SMPD4-212ENST00000451542 MT3P25713 68 aa3.39□□□□□ -1.87
SMPD4-212ENST00000451542 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
SMPD4-212ENST00000451542 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
SMPD4-212ENST00000451542 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
SMPD4-212ENST00000451542 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
SMPD4-212ENST00000451542 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
SMPD4-212ENST00000451542 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
SMPD4-212ENST00000451542 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
SMPD4-212ENST00000451542 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
SMPD4-212ENST00000451542 AHNAKQ09666 5890 aaKnown RBP3□□□□□ -1.93
SMPD4-212ENST00000451542 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
SMPD4-212ENST00000451542 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
SMPD4-212ENST00000451542 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
SMPD4-212ENST00000451542 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
SMPD4-212ENST00000451542 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
SMPD4-212ENST00000451542 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
SMPD4-212ENST00000451542 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
SMPD4-212ENST00000451542 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
SMPD4-212ENST00000451542 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
SMPD4-212ENST00000451542 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
SMPD4-212ENST00000451542 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
SMPD4-212ENST00000451542 INE1O15225 51 aa2.13□□□□□ -2.07
SMPD4-212ENST00000451542 PRM1P04553 51 aa2.13□□□□□ -2.07
SMPD4-212ENST00000451542 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
SMPD4-212ENST00000451542 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
SMPD4-212ENST00000451542 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
SMPD4-212ENST00000451542 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 75.4 ms