RNA–Protein interactions for RNA: ENST00000450454.6

TCEA3-203, Transcript of transcription elongation factor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCEA3, Length 1,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-203ENST00000450454 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
TCEA3-203ENST00000450454 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
TCEA3-203ENST00000450454 TNP1P09430 55 aa4.71□□□□□ -1.66
TCEA3-203ENST00000450454 KRTAP4-8A0A0G2JLE6 195 aa4.65□□□□□ -1.66
TCEA3-203ENST00000450454 KRTAP15-1Q3LI76 137 aa4.65□□□□□ -1.66
TCEA3-203ENST00000450454 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.66
TCEA3-203ENST00000450454 KRTAP10-7P60409 375 aaPredicted RBP4.63□□□□□ -1.67
TCEA3-203ENST00000450454 KRTAP10-12P60413 245 aa4.61□□□□□ -1.67
TCEA3-203ENST00000450454 PP632Q6XCG6 107 aa4.61□□□□□ -1.67
TCEA3-203ENST00000450454 SPRR2DP22532 72 aa4.58□□□□□ -1.68
TCEA3-203ENST00000450454 KRTAP2-2Q9BYT5 123 aa4.57□□□□□ -1.68
TCEA3-203ENST00000450454 KRTAP2-1Q9BYU5 128 aa4.57□□□□□ -1.68
TCEA3-203ENST00000450454 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
TCEA3-203ENST00000450454 LCE3AQ5TA76 89 aa4.5□□□□□ -1.69
TCEA3-203ENST00000450454 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
TCEA3-203ENST00000450454 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
TCEA3-203ENST00000450454 KRTAP4-12Q9BQ66 201 aa4.43□□□□□ -1.7
TCEA3-203ENST00000450454 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
TCEA3-203ENST00000450454 KRTAP19-7Q3SYF9 63 aa4.33□□□□□ -1.72
TCEA3-203ENST00000450454 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
TCEA3-203ENST00000450454 MT1EP04732 61 aa4.31□□□□□ -1.72
TCEA3-203ENST00000450454 LCE5AQ5TCM9 118 aa4.31□□□□□ -1.72
TCEA3-203ENST00000450454 KRTAP19-5Q3LI72 72 aa4.29□□□□□ -1.72
TCEA3-203ENST00000450454 KRTAP19-3Q7Z4W3 81 aa4.29□□□□□ -1.72
TCEA3-203ENST00000450454 LCE1DQ5T752 114 aa4.26□□□□□ -1.73
TCEA3-203ENST00000450454 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
TCEA3-203ENST00000450454 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
TCEA3-203ENST00000450454 INE1O15225 51 aa4.22□□□□□ -1.73
TCEA3-203ENST00000450454 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
TCEA3-203ENST00000450454 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
TCEA3-203ENST00000450454 MT1GP13640 62 aa4.19□□□□□ -1.74
TCEA3-203ENST00000450454 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
TCEA3-203ENST00000450454 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.74
TCEA3-203ENST00000450454 SPRR5A0A1B0GTR4 108 aa4.11□□□□□ -1.75
TCEA3-203ENST00000450454 MT1MQ8N339 61 aa4.1□□□□□ -1.75
TCEA3-203ENST00000450454 MT1LQ93083 61 aa4.1□□□□□ -1.75
TCEA3-203ENST00000450454 GPR98Q8WXG9 6306 aa4.09□□□□□ -1.75
TCEA3-203ENST00000450454 LCE3CQ5T5A8 94 aa4.05□□□□□ -1.76
TCEA3-203ENST00000450454 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
TCEA3-203ENST00000450454 MT4P47944 62 aa4.01□□□□□ -1.77
TCEA3-203ENST00000450454 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
TCEA3-203ENST00000450454 KRTAP4-11Q9BYQ6 195 aa3.96□□□□□ -1.78
TCEA3-203ENST00000450454 KRTAP5-4Q6L8H1 288 aa3.94□□□□□ -1.78
TCEA3-203ENST00000450454 AHNAK2Q8IVF2 5795 aa3.85□□□□□ -1.79
TCEA3-203ENST00000450454 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.8
TCEA3-203ENST00000450454 KRTAP5-10Q6L8G5 202 aa3.79□□□□□ -1.8
TCEA3-203ENST00000450454 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
TCEA3-203ENST00000450454 KRTAP20-2Q3LI61 65 aa3.73□□□□□ -1.81
TCEA3-203ENST00000450454 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
TCEA3-203ENST00000450454 KRTAP5-7Q6L8G8 165 aa3.65□□□□□ -1.82
TCEA3-203ENST00000450454 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
TCEA3-203ENST00000450454 MT1AP04731 61 aa3.5□□□□□ -1.85
TCEA3-203ENST00000450454 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
TCEA3-203ENST00000450454 MT3P25713 68 aa3.46□□□□□ -1.85
TCEA3-203ENST00000450454 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
TCEA3-203ENST00000450454 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
TCEA3-203ENST00000450454 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.88
TCEA3-203ENST00000450454 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
TCEA3-203ENST00000450454 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
TCEA3-203ENST00000450454 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
TCEA3-203ENST00000450454 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
TCEA3-203ENST00000450454 AHNAKQ09666 5890 aaKnown RBP3.2□□□□□ -1.9
TCEA3-203ENST00000450454 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
TCEA3-203ENST00000450454 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
TCEA3-203ENST00000450454 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
TCEA3-203ENST00000450454 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
TCEA3-203ENST00000450454 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
TCEA3-203ENST00000450454 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
TCEA3-203ENST00000450454 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
TCEA3-203ENST00000450454 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
TCEA3-203ENST00000450454 PRM1P04553 51 aa2.6□□□□□ -1.99
TCEA3-203ENST00000450454 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
TCEA3-203ENST00000450454 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
TCEA3-203ENST00000450454 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
TCEA3-203ENST00000450454 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
TCEA3-203ENST00000450454 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
TCEA3-203ENST00000450454 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 62.3 ms