RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 LCE4AQ5TA78 99 aa6.35□□□□□ -1.39
FAM3A-216ENST00000449971 KRTAP5-10Q6L8G5 202 aa6.31□□□□□ -1.4
FAM3A-216ENST00000449971 MT1GP13640 62 aa6.3□□□□□ -1.4
FAM3A-216ENST00000449971 LCE3AQ5TA76 89 aa6.29□□□□□ -1.4
FAM3A-216ENST00000449971 UQCR11O14957 56 aa6.28□□□□□ -1.4
FAM3A-216ENST00000449971 PP632Q6XCG6 107 aa6.26□□□□□ -1.41
FAM3A-216ENST00000449971 MT1LQ93083 61 aa6.23□□□□□ -1.41
FAM3A-216ENST00000449971 MT1MQ8N339 61 aa6.19□□□□□ -1.42
FAM3A-216ENST00000449971 KRTAP4-6Q9BYQ5 205 aa6.19□□□□□ -1.42
FAM3A-216ENST00000449971 MIR22HGQ0VDD5 57 aa6.15□□□□□ -1.42
FAM3A-216ENST00000449971 KRTAP5-7Q6L8G8 165 aa6.13□□□□□ -1.43
FAM3A-216ENST00000449971 KRTAP5-4Q6L8H1 288 aa6.1□□□□□ -1.43
FAM3A-216ENST00000449971 KRTAP4-3Q9BYR4 195 aa6.1□□□□□ -1.43
FAM3A-216ENST00000449971 SPRR5A0A1B0GTR4 108 aa6.06□□□□□ -1.44
FAM3A-216ENST00000449971 PSPHP1O15172 72 aa6.06□□□□□ -1.44
FAM3A-216ENST00000449971 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
FAM3A-216ENST00000449971 KRTAP5-3Q6L8H2 238 aa6.06□□□□□ -1.44
FAM3A-216ENST00000449971 V9GYY9 64 aa6.06□□□□□ -1.44
FAM3A-216ENST00000449971 K7ERS5 55 aa6.05□□□□□ -1.44
FAM3A-216ENST00000449971 Q1T7F1 81 aa6.01□□□□□ -1.45
FAM3A-216ENST00000449971 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
FAM3A-216ENST00000449971 KRTAP4-7Q9BYR0 210 aa5.95□□□□□ -1.46
FAM3A-216ENST00000449971 A6NED7 52 aa5.86□□□□□ -1.47
FAM3A-216ENST00000449971 RPS28P62857 69 aaKnown RBP5.85□□□□□ -1.47
FAM3A-216ENST00000449971 KRTAP20-2Q3LI61 65 aa5.85□□□□□ -1.47
FAM3A-216ENST00000449971 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
FAM3A-216ENST00000449971 CDC42SE1Q9NRR8 79 aa5.71□□□□□ -1.5
FAM3A-216ENST00000449971 KRTAP19-4Q3LI73 84 aa5.69□□□□□ -1.5
FAM3A-216ENST00000449971 KRTAP12-4P60329 112 aa5.68□□□□□ -1.5
FAM3A-216ENST00000449971 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
FAM3A-216ENST00000449971 KRTAP5-5Q701N2 237 aaPredicted RBP5.64□□□□□ -1.51
FAM3A-216ENST00000449971 LOC100996750A0A140TA64 210 aa5.63□□□□□ -1.51
FAM3A-216ENST00000449971 ROMO1P60602 79 aa5.62□□□□□ -1.51
FAM3A-216ENST00000449971 SYNE1Q8NF91 8797 aaKnown RBP5.61□□□□□ -1.51
FAM3A-216ENST00000449971 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
FAM3A-216ENST00000449971 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
FAM3A-216ENST00000449971 AHNAKQ09666 5890 aaKnown RBP5.48□□□□□ -1.53
FAM3A-216ENST00000449971 MUC5BQ9HC84 5762 aaPredicted RBP5.39□□□□□ -1.55
FAM3A-216ENST00000449971 MUC5ACP98088 5654 aa5.39□□□□□ -1.55
FAM3A-216ENST00000449971 KRTAP5-8O75690 187 aa5.32□□□□□ -1.56
FAM3A-216ENST00000449971 BRK1Q8WUW1 75 aa5.31□□□□□ -1.56
FAM3A-216ENST00000449971 MT1AP04731 61 aa5.3□□□□□ -1.56
FAM3A-216ENST00000449971 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
FAM3A-216ENST00000449971 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
FAM3A-216ENST00000449971 KRTAP5-2Q701N4 177 aa5.25□□□□□ -1.57
FAM3A-216ENST00000449971 OBSCNQ5VST9 7968 aa5.2□□□□□ -1.58
FAM3A-216ENST00000449971 KRTAP9-9Q9BYP9 154 aa5.15□□□□□ -1.59
FAM3A-216ENST00000449971 KRTAP9-4Q9BYQ2 154 aa5.13□□□□□ -1.59
FAM3A-216ENST00000449971 PRO0628Q9UI54 55 aa5.11□□□□□ -1.59
FAM3A-216ENST00000449971 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
FAM3A-216ENST00000449971 PMAIP1Q13794 54 aa5□□□□□ -1.61
FAM3A-216ENST00000449971 MT3P25713 68 aa4.86□□□□□ -1.63
FAM3A-216ENST00000449971 KRTAP5-1Q6L8H4 278 aa4.83□□□□□ -1.64
FAM3A-216ENST00000449971 KTN1-AS1Q86SY8 53 aa4.76□□□□□ -1.65
FAM3A-216ENST00000449971 PRAC1Q96KF2 57 aa4.74□□□□□ -1.65
FAM3A-216ENST00000449971 SVIPQ8NHG7 77 aa4.54□□□□□ -1.68
FAM3A-216ENST00000449971 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
FAM3A-216ENST00000449971 LCE1BQ5T7P3 118 aa4.34□□□□□ -1.71
FAM3A-216ENST00000449971 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
FAM3A-216ENST00000449971 KRTAP4-12Q9BQ66 201 aa4.19□□□□□ -1.74
FAM3A-216ENST00000449971 LCE1CQ5T751 118 aa4.11□□□□□ -1.75
FAM3A-216ENST00000449971 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
FAM3A-216ENST00000449971 H3BS24 57 aa3.94□□□□□ -1.78
FAM3A-216ENST00000449971 LUZP6Q538Z0 58 aa3.88□□□□□ -1.79
FAM3A-216ENST00000449971 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
FAM3A-216ENST00000449971 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
FAM3A-216ENST00000449971 PHGR1C9JFL3 82 aa3.76□□□□□ -1.81
FAM3A-216ENST00000449971 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
FAM3A-216ENST00000449971 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.72□□□□□ -1.81
FAM3A-216ENST00000449971 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
FAM3A-216ENST00000449971 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
FAM3A-216ENST00000449971 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
FAM3A-216ENST00000449971 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
FAM3A-216ENST00000449971 A0A0A0MQY5 61 aa3.21□□□□□ -1.9
FAM3A-216ENST00000449971 INE1O15225 51 aa3.02□□□□□ -1.93
FAM3A-216ENST00000449971 PRM1P04553 51 aa2.88□□□□□ -1.95
FAM3A-216ENST00000449971 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
FAM3A-216ENST00000449971 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 34.2 ms