RNA–Protein interactions for RNA: ENST00000449505.5

PBRM1-216, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-216ENST00000449505 A0A1B0GU33 70 aa2.52□□□□□ -2.01
PBRM1-216ENST00000449505 SMIM26A0A096LP01 95 aa2.5□□□□□ -2.01
PBRM1-216ENST00000449505 SPATA8Q6RVD6 105 aa2.5□□□□□ -2.01
PBRM1-216ENST00000449505 KRTAP19-5Q3LI72 72 aa2.49□□□□□ -2.01
PBRM1-216ENST00000449505 KRTAP12-1P59990 96 aa2.48□□□□□ -2.01
PBRM1-216ENST00000449505 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
PBRM1-216ENST00000449505 A0A1B0GU69 56 aa2.47□□□□□ -2.01
PBRM1-216ENST00000449505 TNP1P09430 55 aa2.46□□□□□ -2.02
PBRM1-216ENST00000449505 MT1MQ8N339 61 aa2.46□□□□□ -2.02
PBRM1-216ENST00000449505 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
PBRM1-216ENST00000449505 KRTAP23-1A1A580 65 aa2.45□□□□□ -2.02
PBRM1-216ENST00000449505 COX7CP15954 63 aa2.45□□□□□ -2.02
PBRM1-216ENST00000449505 MT4P47944 62 aa2.44□□□□□ -2.02
PBRM1-216ENST00000449505 MT1LQ93083 61 aa2.44□□□□□ -2.02
PBRM1-216ENST00000449505 H7BZZ5 65 aa2.41□□□□□ -2.02
PBRM1-216ENST00000449505 PRR15LQ9BU68 103 aa2.41□□□□□ -2.02
PBRM1-216ENST00000449505 C10orf95Q9H7T3 257 aa2.41□□□□□ -2.02
PBRM1-216ENST00000449505 LCE3AQ5TA76 89 aa2.4□□□□□ -2.03
PBRM1-216ENST00000449505 A8MU10 97 aa2.38□□□□□ -2.03
PBRM1-216ENST00000449505 ATP5EP56381 51 aaPredicted RBP2.35□□□□□ -2.03
PBRM1-216ENST00000449505 KRTAP12-3P60328 96 aa2.34□□□□□ -2.03
PBRM1-216ENST00000449505 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
PBRM1-216ENST00000449505 KRTAP4-3Q9BYR4 195 aa2.34□□□□□ -2.03
PBRM1-216ENST00000449505 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
PBRM1-216ENST00000449505 ANAPC13Q9BS18 74 aa2.32□□□□□ -2.04
PBRM1-216ENST00000449505 UQCR11O14957 56 aa2.29□□□□□ -2.04
PBRM1-216ENST00000449505 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
PBRM1-216ENST00000449505 SPRR5A0A1B0GTR4 108 aa2.28□□□□□ -2.04
PBRM1-216ENST00000449505 KRTAP12-4P60329 112 aa2.28□□□□□ -2.04
PBRM1-216ENST00000449505 KRTAP25-1Q3LHN0 102 aa2.28□□□□□ -2.04
PBRM1-216ENST00000449505 KRTAP20-2Q3LI61 65 aa2.28□□□□□ -2.04
PBRM1-216ENST00000449505 LINC01558Q9Y6Z2 57 aa2.28□□□□□ -2.04
PBRM1-216ENST00000449505 K7ERS5 55 aa2.27□□□□□ -2.05
PBRM1-216ENST00000449505 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
PBRM1-216ENST00000449505 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
PBRM1-216ENST00000449505 SYNE1Q8NF91 8797 aaKnown RBP2.24□□□□□ -2.05
PBRM1-216ENST00000449505 CCDC179H3BU77 68 aa2.22□□□□□ -2.05
PBRM1-216ENST00000449505 TMEM258P61165 79 aa2.21□□□□□ -2.06
PBRM1-216ENST00000449505 MIR22HGQ0VDD5 57 aa2.21□□□□□ -2.06
PBRM1-216ENST00000449505 V9GYY9 64 aa2.16□□□□□ -2.06
PBRM1-216ENST00000449505 LCE3CQ5T5A8 94 aa2.13□□□□□ -2.07
PBRM1-216ENST00000449505 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
PBRM1-216ENST00000449505 MT1AP04731 61 aa2.1□□□□□ -2.07
PBRM1-216ENST00000449505 CDC42SE1Q9NRR8 79 aa2.1□□□□□ -2.07
PBRM1-216ENST00000449505 PSPHP1O15172 72 aa2.08□□□□□ -2.08
PBRM1-216ENST00000449505 MT3P25713 68 aa2.08□□□□□ -2.08
PBRM1-216ENST00000449505 RPS28P62857 69 aaKnown RBP2.08□□□□□ -2.08
PBRM1-216ENST00000449505 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
PBRM1-216ENST00000449505 Q1T7F1 81 aa2.06□□□□□ -2.08
PBRM1-216ENST00000449505 A6NED7 52 aa2.05□□□□□ -2.08
PBRM1-216ENST00000449505 KRTAP6-1Q3LI64 71 aa2.05□□□□□ -2.08
PBRM1-216ENST00000449505 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
PBRM1-216ENST00000449505 ROMO1P60602 79 aa2.02□□□□□ -2.09
PBRM1-216ENST00000449505 KRTAP9-6A8MVA2 160 aa2.01□□□□□ -2.09
PBRM1-216ENST00000449505 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
PBRM1-216ENST00000449505 KRTAP6-2Q3LI66 62 aa1.99□□□□□ -2.09
PBRM1-216ENST00000449505 PCP4P48539 62 aa1.7□□□□□ -2.14
PBRM1-216ENST00000449505 LCE1BQ5T7P3 118 aa1.68□□□□□ -2.14
PBRM1-216ENST00000449505 LCE1FQ5T754 118 aa1.67□□□□□ -2.14
PBRM1-216ENST00000449505 LCE1CQ5T751 118 aa1.66□□□□□ -2.14
PBRM1-216ENST00000449505 BRK1Q8WUW1 75 aa1.64□□□□□ -2.15
PBRM1-216ENST00000449505 LCE3DQ9BYE3 92 aa1.54□□□□□ -2.16
PBRM1-216ENST00000449505 PMAIP1Q13794 54 aa1.53□□□□□ -2.16
PBRM1-216ENST00000449505 LCE3EQ5T5B0 92 aa1.45□□□□□ -2.18
PBRM1-216ENST00000449505 PRAC1Q96KF2 57 aa1.44□□□□□ -2.18
PBRM1-216ENST00000449505 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
PBRM1-216ENST00000449505 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
PBRM1-216ENST00000449505 LUZP6Q538Z0 58 aa1.36□□□□□ -2.19
PBRM1-216ENST00000449505 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
PBRM1-216ENST00000449505 PRO0628Q9UI54 55 aa1.31□□□□□ -2.2
PBRM1-216ENST00000449505 KTN1-AS1Q86SY8 53 aa1.3□□□□□ -2.2
PBRM1-216ENST00000449505 SVIPQ8NHG7 77 aa1.3□□□□□ -2.2
PBRM1-216ENST00000449505 NDUFAF8A1L188 74 aa1.18□□□□□ -2.22
PBRM1-216ENST00000449505 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
PBRM1-216ENST00000449505 A0A0A0MQY5 61 aa1.08□□□□□ -2.24
PBRM1-216ENST00000449505 PRM1P04553 51 aa1.01□□□□□ -2.25
PBRM1-216ENST00000449505 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
PBRM1-216ENST00000449505 INE1O15225 51 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 38.8 ms