RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 MDN1Q9NU22 5596 aa6.86□□□□□ -1.31
RPS28-202ENST00000449223 KRTAP19-3Q7Z4W3 81 aa6.86□□□□□ -1.31
RPS28-202ENST00000449223 LCE1AQ5T7P2 110 aa6.86□□□□□ -1.31
RPS28-202ENST00000449223 SVIPQ8NHG7 77 aa6.84□□□□□ -1.31
RPS28-202ENST00000449223 KRTAP19-4Q3LI73 84 aa6.83□□□□□ -1.32
RPS28-202ENST00000449223 LCE5AQ5TCM9 118 aa6.8□□□□□ -1.32
RPS28-202ENST00000449223 MT1GP13640 62 aa6.79□□□□□ -1.32
RPS28-202ENST00000449223 SPRR2EP22531 72 aa6.79□□□□□ -1.32
RPS28-202ENST00000449223 SPRR2BP35325 72 aa6.79□□□□□ -1.32
RPS28-202ENST00000449223 SPRR2AP35326 72 aa6.79□□□□□ -1.32
RPS28-202ENST00000449223 MT1MQ8N339 61 aa6.67□□□□□ -1.34
RPS28-202ENST00000449223 LCE3CQ5T5A8 94 aa6.64□□□□□ -1.35
RPS28-202ENST00000449223 NEBP20929 6669 aa6.59□□□□□ -1.35
RPS28-202ENST00000449223 KRTAP4-7Q9BYR0 210 aa6.56□□□□□ -1.36
RPS28-202ENST00000449223 SPRR2DP22532 72 aa6.55□□□□□ -1.36
RPS28-202ENST00000449223 KRTAP4-3Q9BYR4 195 aa6.45□□□□□ -1.38
RPS28-202ENST00000449223 SPRR5A0A1B0GTR4 108 aa6.42□□□□□ -1.38
RPS28-202ENST00000449223 DSTQ03001 7570 aaKnown RBP6.33□□□□□ -1.4
RPS28-202ENST00000449223 LCE3BQ5TA77 95 aa6.33□□□□□ -1.4
RPS28-202ENST00000449223 KRTAP2-3P0C7H8 128 aa6.3□□□□□ -1.4
RPS28-202ENST00000449223 KRTAP2-4Q9BYR9 128 aa6.3□□□□□ -1.4
RPS28-202ENST00000449223 KRTAP9-6A8MVA2 160 aa6.26□□□□□ -1.41
RPS28-202ENST00000449223 KRTAP20-1Q3LI63 56 aa6.24□□□□□ -1.41
RPS28-202ENST00000449223 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
RPS28-202ENST00000449223 KRTAP2-2Q9BYT5 123 aa6.15□□□□□ -1.42
RPS28-202ENST00000449223 KRTAP2-1Q9BYU5 128 aa6.15□□□□□ -1.42
RPS28-202ENST00000449223 KRTAP5-5Q701N2 237 aaPredicted RBP6.1□□□□□ -1.43
RPS28-202ENST00000449223 LUZP6Q538Z0 58 aa5.96□□□□□ -1.46
RPS28-202ENST00000449223 KRTAP5-4Q6L8H1 288 aa5.96□□□□□ -1.46
RPS28-202ENST00000449223 LCE4AQ5TA78 99 aa5.89□□□□□ -1.47
RPS28-202ENST00000449223 MT1AP04731 61 aa5.87□□□□□ -1.47
RPS28-202ENST00000449223 KRTAP6-1Q3LI64 71 aa5.79□□□□□ -1.48
RPS28-202ENST00000449223 KRTAP12-4P60329 112 aa5.69□□□□□ -1.5
RPS28-202ENST00000449223 MT4P47944 62 aa5.66□□□□□ -1.5
RPS28-202ENST00000449223 LCE1DQ5T752 114 aa5.66□□□□□ -1.5
RPS28-202ENST00000449223 KRTAP4-9Q9BYQ8 210 aa5.66□□□□□ -1.5
RPS28-202ENST00000449223 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
RPS28-202ENST00000449223 KRTAP4-6Q9BYQ5 205 aa5.62□□□□□ -1.51
RPS28-202ENST00000449223 KRTAP9-4Q9BYQ2 154 aa5.59□□□□□ -1.51
RPS28-202ENST00000449223 NDUFAF8A1L188 74 aa5.58□□□□□ -1.52
RPS28-202ENST00000449223 HMCN1Q96RW7 5635 aa5.57□□□□□ -1.52
RPS28-202ENST00000449223 KRTAP20-2Q3LI61 65 aa5.54□□□□□ -1.52
RPS28-202ENST00000449223 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
RPS28-202ENST00000449223 KRTAP6-2Q3LI66 62 aa5.37□□□□□ -1.55
RPS28-202ENST00000449223 KRTAP5-2Q701N4 177 aa5.37□□□□□ -1.55
RPS28-202ENST00000449223 MT3P25713 68 aa5.33□□□□□ -1.56
RPS28-202ENST00000449223 AHNAK2Q8IVF2 5795 aa5.02□□□□□ -1.61
RPS28-202ENST00000449223 GPR98Q8WXG9 6306 aa4.99□□□□□ -1.61
RPS28-202ENST00000449223 LCE3DQ9BYE3 92 aa4.93□□□□□ -1.62
RPS28-202ENST00000449223 KRTAP5-10Q6L8G5 202 aa4.9□□□□□ -1.63
RPS28-202ENST00000449223 KRTAP4-11Q9BYQ6 195 aa4.87□□□□□ -1.63
RPS28-202ENST00000449223 A0A0A0MQY5 61 aa4.85□□□□□ -1.63
RPS28-202ENST00000449223 OBSCNQ5VST9 7968 aa4.82□□□□□ -1.64
RPS28-202ENST00000449223 LCE3EQ5T5B0 92 aa4.77□□□□□ -1.65
RPS28-202ENST00000449223 LCE1EQ5T753 118 aa4.75□□□□□ -1.65
RPS28-202ENST00000449223 KRTAP5-8O75690 187 aa4.7□□□□□ -1.66
RPS28-202ENST00000449223 INE1O15225 51 aa4.67□□□□□ -1.66
RPS28-202ENST00000449223 KRTAP5-1Q6L8H4 278 aa4.67□□□□□ -1.66
RPS28-202ENST00000449223 KRTAP5-7Q6L8G8 165 aa4.6□□□□□ -1.67
RPS28-202ENST00000449223 MUC5ACP98088 5654 aa4.46□□□□□ -1.69
RPS28-202ENST00000449223 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
RPS28-202ENST00000449223 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
RPS28-202ENST00000449223 KRTAP4-2Q9BYR5 136 aa4.41□□□□□ -1.7
RPS28-202ENST00000449223 H3BS24 57 aa4.34□□□□□ -1.71
RPS28-202ENST00000449223 KRTAP9-9Q9BYP9 154 aa4.27□□□□□ -1.73
RPS28-202ENST00000449223 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
RPS28-202ENST00000449223 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.13□□□□□ -1.75
RPS28-202ENST00000449223 MUC5BQ9HC84 5762 aaPredicted RBP4.07□□□□□ -1.76
RPS28-202ENST00000449223 PRM1P04553 51 aa4□□□□□ -1.77
RPS28-202ENST00000449223 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
RPS28-202ENST00000449223 AHNAKQ09666 5890 aaKnown RBP3.9□□□□□ -1.78
RPS28-202ENST00000449223 KRTAP21-2Q3LI59 83 aa3.83□□□□□ -1.8
RPS28-202ENST00000449223 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
RPS28-202ENST00000449223 PHGR1C9JFL3 82 aa3.36□□□□□ -1.87
RPS28-202ENST00000449223 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
RPS28-202ENST00000449223 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
RPS28-202ENST00000449223 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
RPS28-202ENST00000449223 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 10.4 ms