RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 LCE3BQ5TA77 95 aa4.03□□□□□ -1.76
SMPD4-211ENST00000449159 GPR98Q8WXG9 6306 aa4.03□□□□□ -1.77
SMPD4-211ENST00000449159 K7ERS5 55 aa4.01□□□□□ -1.77
SMPD4-211ENST00000449159 TNP1P09430 55 aa4.01□□□□□ -1.77
SMPD4-211ENST00000449159 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
SMPD4-211ENST00000449159 LCE3AQ5TA76 89 aa3.97□□□□□ -1.77
SMPD4-211ENST00000449159 KRTAP19-5Q3LI72 72 aa3.95□□□□□ -1.78
SMPD4-211ENST00000449159 MT1EP04732 61 aa3.94□□□□□ -1.78
SMPD4-211ENST00000449159 DSTQ03001 7570 aaKnown RBP3.92□□□□□ -1.78
SMPD4-211ENST00000449159 H3BS24 57 aa3.92□□□□□ -1.78
SMPD4-211ENST00000449159 KRTAP25-1Q3LHN0 102 aa3.91□□□□□ -1.78
SMPD4-211ENST00000449159 KRTAP19-3Q7Z4W3 81 aa3.85□□□□□ -1.79
SMPD4-211ENST00000449159 ROMO1P60602 79 aa3.84□□□□□ -1.79
SMPD4-211ENST00000449159 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.79
SMPD4-211ENST00000449159 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
SMPD4-211ENST00000449159 MT1LQ93083 61 aa3.8□□□□□ -1.8
SMPD4-211ENST00000449159 KRTAP4-9Q9BYQ8 210 aa3.79□□□□□ -1.8
SMPD4-211ENST00000449159 MT1GP13640 62 aa3.76□□□□□ -1.81
SMPD4-211ENST00000449159 MT1MQ8N339 61 aa3.74□□□□□ -1.81
SMPD4-211ENST00000449159 KRTAP23-1A1A580 65 aa3.73□□□□□ -1.81
SMPD4-211ENST00000449159 PP632Q6XCG6 107 aa3.71□□□□□ -1.82
SMPD4-211ENST00000449159 HMCN1Q96RW7 5635 aa3.71□□□□□ -1.82
SMPD4-211ENST00000449159 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
SMPD4-211ENST00000449159 KRTAP4-3Q9BYR4 195 aa3.68□□□□□ -1.82
SMPD4-211ENST00000449159 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
SMPD4-211ENST00000449159 AHNAK2Q8IVF2 5795 aa3.64□□□□□ -1.83
SMPD4-211ENST00000449159 MT4P47944 62 aa3.62□□□□□ -1.83
SMPD4-211ENST00000449159 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
SMPD4-211ENST00000449159 LCE4AQ5TA78 99 aa3.61□□□□□ -1.83
SMPD4-211ENST00000449159 KRTAP5-10Q6L8G5 202 aa3.56□□□□□ -1.84
SMPD4-211ENST00000449159 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
SMPD4-211ENST00000449159 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
SMPD4-211ENST00000449159 KRTAP19-4Q3LI73 84 aa3.51□□□□□ -1.85
SMPD4-211ENST00000449159 KRTAP5-4Q6L8H1 288 aa3.5□□□□□ -1.85
SMPD4-211ENST00000449159 LOC100996750A0A140TA64 210 aa3.46□□□□□ -1.86
SMPD4-211ENST00000449159 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
SMPD4-211ENST00000449159 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
SMPD4-211ENST00000449159 KRTAP5-3Q6L8H2 238 aa3.41□□□□□ -1.86
SMPD4-211ENST00000449159 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
SMPD4-211ENST00000449159 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
SMPD4-211ENST00000449159 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
SMPD4-211ENST00000449159 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
SMPD4-211ENST00000449159 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
SMPD4-211ENST00000449159 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
SMPD4-211ENST00000449159 A0A0A0MQY5 61 aa3.3□□□□□ -1.88
SMPD4-211ENST00000449159 MT1AP04731 61 aa3.23□□□□□ -1.89
SMPD4-211ENST00000449159 KRTAP12-4P60329 112 aa3.23□□□□□ -1.89
SMPD4-211ENST00000449159 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
SMPD4-211ENST00000449159 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
SMPD4-211ENST00000449159 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
SMPD4-211ENST00000449159 KRTAP9-4Q9BYQ2 154 aa3.09□□□□□ -1.91
SMPD4-211ENST00000449159 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.91
SMPD4-211ENST00000449159 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
SMPD4-211ENST00000449159 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
SMPD4-211ENST00000449159 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
SMPD4-211ENST00000449159 INE1O15225 51 aa3.01□□□□□ -1.93
SMPD4-211ENST00000449159 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
SMPD4-211ENST00000449159 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
SMPD4-211ENST00000449159 MT3P25713 68 aa2.92□□□□□ -1.94
SMPD4-211ENST00000449159 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.95
SMPD4-211ENST00000449159 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
SMPD4-211ENST00000449159 LCE1EQ5T753 118 aa2.62□□□□□ -1.99
SMPD4-211ENST00000449159 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
SMPD4-211ENST00000449159 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
SMPD4-211ENST00000449159 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
SMPD4-211ENST00000449159 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
SMPD4-211ENST00000449159 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
SMPD4-211ENST00000449159 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
SMPD4-211ENST00000449159 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
SMPD4-211ENST00000449159 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
SMPD4-211ENST00000449159 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
SMPD4-211ENST00000449159 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
SMPD4-211ENST00000449159 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
SMPD4-211ENST00000449159 PRM1P04553 51 aa1.99□□□□□ -2.09
SMPD4-211ENST00000449159 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
SMPD4-211ENST00000449159 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
SMPD4-211ENST00000449159 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
SMPD4-211ENST00000449159 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms