RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 SPRR5A0A1B0GTR4 108 aa5.19□□□□□ -1.58
SHMT2-203ENST00000449049 MT1EP04732 61 aa5.17□□□□□ -1.58
SHMT2-203ENST00000449049 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
SHMT2-203ENST00000449049 INE1O15225 51 aa5.13□□□□□ -1.59
SHMT2-203ENST00000449049 LCE1AQ5T7P2 110 aa5.06□□□□□ -1.6
SHMT2-203ENST00000449049 MUC12Q9UKN1 5478 aa5.06□□□□□ -1.6
SHMT2-203ENST00000449049 SPRR2EP22531 72 aa5.05□□□□□ -1.6
SHMT2-203ENST00000449049 SPRR2BP35325 72 aa5.05□□□□□ -1.6
SHMT2-203ENST00000449049 SPRR2AP35326 72 aa5.05□□□□□ -1.6
SHMT2-203ENST00000449049 MT1LQ93083 61 aa5.03□□□□□ -1.6
SHMT2-203ENST00000449049 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
SHMT2-203ENST00000449049 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
SHMT2-203ENST00000449049 LCE5AQ5TCM9 118 aa4.97□□□□□ -1.61
SHMT2-203ENST00000449049 MT1GP13640 62 aa4.96□□□□□ -1.62
SHMT2-203ENST00000449049 NEBP20929 6669 aa4.93□□□□□ -1.62
SHMT2-203ENST00000449049 KRTAP19-4Q3LI73 84 aa4.9□□□□□ -1.62
SHMT2-203ENST00000449049 MT1MQ8N339 61 aa4.89□□□□□ -1.63
SHMT2-203ENST00000449049 SPRR2DP22532 72 aa4.87□□□□□ -1.63
SHMT2-203ENST00000449049 KRTAP4-7Q9BYR0 210 aa4.81□□□□□ -1.64
SHMT2-203ENST00000449049 LCE3CQ5T5A8 94 aa4.8□□□□□ -1.64
SHMT2-203ENST00000449049 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
SHMT2-203ENST00000449049 LCE3BQ5TA77 95 aa4.7□□□□□ -1.66
SHMT2-203ENST00000449049 KRTAP2-3P0C7H8 128 aa4.7□□□□□ -1.66
SHMT2-203ENST00000449049 KRTAP2-4Q9BYR9 128 aa4.7□□□□□ -1.66
SHMT2-203ENST00000449049 KRTAP20-1Q3LI63 56 aa4.69□□□□□ -1.66
SHMT2-203ENST00000449049 DSTQ03001 7570 aaKnown RBP4.59□□□□□ -1.67
SHMT2-203ENST00000449049 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
SHMT2-203ENST00000449049 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
SHMT2-203ENST00000449049 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
SHMT2-203ENST00000449049 LOC100996750A0A140TA64 210 aa4.52□□□□□ -1.69
SHMT2-203ENST00000449049 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
SHMT2-203ENST00000449049 KRTAP5-4Q6L8H1 288 aa4.38□□□□□ -1.71
SHMT2-203ENST00000449049 LCE4AQ5TA78 99 aa4.34□□□□□ -1.71
SHMT2-203ENST00000449049 MT1AP04731 61 aa4.28□□□□□ -1.72
SHMT2-203ENST00000449049 KRTAP4-9Q9BYQ8 210 aa4.24□□□□□ -1.73
SHMT2-203ENST00000449049 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
SHMT2-203ENST00000449049 MT4P47944 62 aa4.22□□□□□ -1.73
SHMT2-203ENST00000449049 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
SHMT2-203ENST00000449049 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
SHMT2-203ENST00000449049 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
SHMT2-203ENST00000449049 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
SHMT2-203ENST00000449049 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
SHMT2-203ENST00000449049 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.76
SHMT2-203ENST00000449049 HMCN1Q96RW7 5635 aa4.06□□□□□ -1.76
SHMT2-203ENST00000449049 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.78
SHMT2-203ENST00000449049 KRTAP6-2Q3LI66 62 aa3.94□□□□□ -1.78
SHMT2-203ENST00000449049 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
SHMT2-203ENST00000449049 MT3P25713 68 aa3.89□□□□□ -1.79
SHMT2-203ENST00000449049 AHNAK2Q8IVF2 5795 aa3.7□□□□□ -1.82
SHMT2-203ENST00000449049 KRTAP5-10Q6L8G5 202 aa3.66□□□□□ -1.82
SHMT2-203ENST00000449049 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
SHMT2-203ENST00000449049 GPR98Q8WXG9 6306 aa3.56□□□□□ -1.84
SHMT2-203ENST00000449049 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
SHMT2-203ENST00000449049 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
SHMT2-203ENST00000449049 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
SHMT2-203ENST00000449049 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
SHMT2-203ENST00000449049 KRTAP5-7Q6L8G8 165 aa3.45□□□□□ -1.86
SHMT2-203ENST00000449049 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
SHMT2-203ENST00000449049 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
SHMT2-203ENST00000449049 PRM1P04553 51 aa3.37□□□□□ -1.87
SHMT2-203ENST00000449049 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
SHMT2-203ENST00000449049 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
SHMT2-203ENST00000449049 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
SHMT2-203ENST00000449049 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
SHMT2-203ENST00000449049 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
SHMT2-203ENST00000449049 KRTAP9-9Q9BYP9 154 aa3.19□□□□□ -1.9
SHMT2-203ENST00000449049 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
SHMT2-203ENST00000449049 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
SHMT2-203ENST00000449049 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
SHMT2-203ENST00000449049 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
SHMT2-203ENST00000449049 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
SHMT2-203ENST00000449049 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
SHMT2-203ENST00000449049 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
SHMT2-203ENST00000449049 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
SHMT2-203ENST00000449049 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
SHMT2-203ENST00000449049 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
SHMT2-203ENST00000449049 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 12.9 ms