RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 KRTAP4-8A0A0G2JLE6 195 aa3.35□□□□□ -1.87
CPSF7-206ENST00000448745 NEBP20929 6669 aa3.34□□□□□ -1.87
CPSF7-206ENST00000448745 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
CPSF7-206ENST00000448745 KRTAP20-1Q3LI63 56 aa3.32□□□□□ -1.88
CPSF7-206ENST00000448745 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
CPSF7-206ENST00000448745 KRTAP10-12P60413 245 aa3.3□□□□□ -1.88
CPSF7-206ENST00000448745 KRTAP10-5P60370 271 aa3.27□□□□□ -1.89
CPSF7-206ENST00000448745 KRTAP19-6Q3LI70 58 aa3.27□□□□□ -1.89
CPSF7-206ENST00000448745 MT1XP80297 61 aa3.26□□□□□ -1.89
CPSF7-206ENST00000448745 KRTAP4-9Q9BYQ8 210 aa3.22□□□□□ -1.89
CPSF7-206ENST00000448745 KRTAP4-7Q9BYR0 210 aa3.2□□□□□ -1.9
CPSF7-206ENST00000448745 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
CPSF7-206ENST00000448745 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
CPSF7-206ENST00000448745 KRTAP10-7P60409 375 aaPredicted RBP3.16□□□□□ -1.9
CPSF7-206ENST00000448745 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.91
CPSF7-206ENST00000448745 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
CPSF7-206ENST00000448745 KMT2DO14686 5537 aa3.1□□□□□ -1.91
CPSF7-206ENST00000448745 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
CPSF7-206ENST00000448745 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
CPSF7-206ENST00000448745 KRTAP19-5Q3LI72 72 aa3.09□□□□□ -1.91
CPSF7-206ENST00000448745 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
CPSF7-206ENST00000448745 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
CPSF7-206ENST00000448745 MDN1Q9NU22 5596 aa3□□□□□ -1.93
CPSF7-206ENST00000448745 KRTAP2-1Q9BYU5 128 aa2.98□□□□□ -1.93
CPSF7-206ENST00000448745 KRTAP5-9P26371 169 aa2.97□□□□□ -1.93
CPSF7-206ENST00000448745 KRTAP2-2Q9BYT5 123 aa2.96□□□□□ -1.94
CPSF7-206ENST00000448745 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
CPSF7-206ENST00000448745 KRTAP19-7Q3SYF9 63 aa2.9□□□□□ -1.95
CPSF7-206ENST00000448745 MT1LQ93083 61 aa2.85□□□□□ -1.95
CPSF7-206ENST00000448745 SPRR2FQ96RM1 72 aa2.85□□□□□ -1.95
CPSF7-206ENST00000448745 MT3P25713 68 aa2.84□□□□□ -1.96
CPSF7-206ENST00000448745 MT1EP04732 61 aa2.82□□□□□ -1.96
CPSF7-206ENST00000448745 SPRR2EP22531 72 aa2.73□□□□□ -1.97
CPSF7-206ENST00000448745 SPRR2BP35325 72 aa2.73□□□□□ -1.97
CPSF7-206ENST00000448745 SPRR2AP35326 72 aa2.73□□□□□ -1.97
CPSF7-206ENST00000448745 KRTAP19-3Q7Z4W3 81 aa2.73□□□□□ -1.97
CPSF7-206ENST00000448745 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
CPSF7-206ENST00000448745 MT1GP13640 62 aa2.69□□□□□ -1.98
CPSF7-206ENST00000448745 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
CPSF7-206ENST00000448745 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
CPSF7-206ENST00000448745 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
CPSF7-206ENST00000448745 MT1MQ8N339 61 aa2.66□□□□□ -1.98
CPSF7-206ENST00000448745 SPRR2DP22532 72 aa2.65□□□□□ -1.99
CPSF7-206ENST00000448745 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
CPSF7-206ENST00000448745 KRTAP12-4P60329 112 aa2.63□□□□□ -1.99
CPSF7-206ENST00000448745 KRTAP5-3Q6L8H2 238 aa2.62□□□□□ -1.99
CPSF7-206ENST00000448745 KRTAP4-3Q9BYR4 195 aa2.62□□□□□ -1.99
CPSF7-206ENST00000448745 HMCN1Q96RW7 5635 aa2.6□□□□□ -1.99
CPSF7-206ENST00000448745 MT1AP04731 61 aa2.53□□□□□ -2
CPSF7-206ENST00000448745 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
CPSF7-206ENST00000448745 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
CPSF7-206ENST00000448745 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
CPSF7-206ENST00000448745 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
CPSF7-206ENST00000448745 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.03
CPSF7-206ENST00000448745 KRTAP6-1Q3LI64 71 aa2.39□□□□□ -2.03
CPSF7-206ENST00000448745 PRM1P04553 51 aa2.37□□□□□ -2.03
CPSF7-206ENST00000448745 MT4P47944 62 aa2.34□□□□□ -2.04
CPSF7-206ENST00000448745 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
CPSF7-206ENST00000448745 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
CPSF7-206ENST00000448745 LCE1EQ5T753 118 aa2.3□□□□□ -2.04
CPSF7-206ENST00000448745 SYNE1Q8NF91 8797 aaKnown RBP2.28□□□□□ -2.04
CPSF7-206ENST00000448745 KRTAP6-2Q3LI66 62 aa2.25□□□□□ -2.05
CPSF7-206ENST00000448745 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
CPSF7-206ENST00000448745 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
CPSF7-206ENST00000448745 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
CPSF7-206ENST00000448745 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
CPSF7-206ENST00000448745 OBSCNQ5VST9 7968 aa2.03□□□□□ -2.08
CPSF7-206ENST00000448745 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.97□□□□□ -2.09
CPSF7-206ENST00000448745 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.11
CPSF7-206ENST00000448745 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
CPSF7-206ENST00000448745 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
CPSF7-206ENST00000448745 KRTAP4-4Q9BYR3 166 aa1.63□□□□□ -2.15
CPSF7-206ENST00000448745 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
CPSF7-206ENST00000448745 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
CPSF7-206ENST00000448745 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
CPSF7-206ENST00000448745 MUC19Q7Z5P9 8384 aa1.25□□□□□ -2.21
CPSF7-206ENST00000448745 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 15.2 ms