RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 LCE3CQ5T5A8 94 aa6.32□□□□□ -1.4
LMNA-208ENST00000448611 KRTAP6-3Q3LI67 103 aa6.3□□□□□ -1.4
LMNA-208ENST00000448611 MT1LQ93083 61 aa6.28□□□□□ -1.4
LMNA-208ENST00000448611 KRTAP5-9P26371 169 aa6.24□□□□□ -1.41
LMNA-208ENST00000448611 SPRR2FQ96RM1 72 aa6.24□□□□□ -1.41
LMNA-208ENST00000448611 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
LMNA-208ENST00000448611 KRTAP4-7Q9BYR0 210 aa6.15□□□□□ -1.43
LMNA-208ENST00000448611 MUC12Q9UKN1 5478 aa6.12□□□□□ -1.43
LMNA-208ENST00000448611 KRTAP19-3Q7Z4W3 81 aa6.07□□□□□ -1.44
LMNA-208ENST00000448611 KRTAP9-6A8MVA2 160 aa6.03□□□□□ -1.44
LMNA-208ENST00000448611 MDN1Q9NU22 5596 aa6.03□□□□□ -1.44
LMNA-208ENST00000448611 MT1GP13640 62 aa6.01□□□□□ -1.45
LMNA-208ENST00000448611 SPRR2EP22531 72 aa6.01□□□□□ -1.45
LMNA-208ENST00000448611 SPRR2BP35325 72 aa6.01□□□□□ -1.45
LMNA-208ENST00000448611 SPRR2AP35326 72 aa6.01□□□□□ -1.45
LMNA-208ENST00000448611 LCE1AQ5T7P2 110 aa5.98□□□□□ -1.45
LMNA-208ENST00000448611 MT1MQ8N339 61 aa5.98□□□□□ -1.45
LMNA-208ENST00000448611 LCE5AQ5TCM9 118 aa5.94□□□□□ -1.46
LMNA-208ENST00000448611 KRTAP4-3Q9BYR4 195 aa5.91□□□□□ -1.46
LMNA-208ENST00000448611 NEBP20929 6669 aa5.9□□□□□ -1.46
LMNA-208ENST00000448611 SPRR2DP22532 72 aa5.79□□□□□ -1.48
LMNA-208ENST00000448611 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
LMNA-208ENST00000448611 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
LMNA-208ENST00000448611 KRTAP2-3P0C7H8 128 aa5.64□□□□□ -1.51
LMNA-208ENST00000448611 KRTAP2-4Q9BYR9 128 aa5.64□□□□□ -1.51
LMNA-208ENST00000448611 KRTAP2-1Q9BYU5 128 aa5.64□□□□□ -1.51
LMNA-208ENST00000448611 KRTAP20-1Q3LI63 56 aa5.6□□□□□ -1.51
LMNA-208ENST00000448611 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
LMNA-208ENST00000448611 KRTAP2-2Q9BYT5 123 aa5.45□□□□□ -1.54
LMNA-208ENST00000448611 KRTAP5-5Q701N2 237 aaPredicted RBP5.38□□□□□ -1.55
LMNA-208ENST00000448611 MT1AP04731 61 aa5.32□□□□□ -1.56
LMNA-208ENST00000448611 KRTAP6-1Q3LI64 71 aa5.3□□□□□ -1.56
LMNA-208ENST00000448611 INE1O15225 51 aa5.29□□□□□ -1.56
LMNA-208ENST00000448611 KRTAP5-4Q6L8H1 288 aa5.11□□□□□ -1.59
LMNA-208ENST00000448611 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
LMNA-208ENST00000448611 KRTAP4-9Q9BYQ8 210 aa5.1□□□□□ -1.59
LMNA-208ENST00000448611 SYNE1Q8NF91 8797 aaKnown RBP5.09□□□□□ -1.59
LMNA-208ENST00000448611 MT4P47944 62 aa5.06□□□□□ -1.6
LMNA-208ENST00000448611 KRTAP9-4Q9BYQ2 154 aa5.03□□□□□ -1.6
LMNA-208ENST00000448611 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
LMNA-208ENST00000448611 KRTAP4-6Q9BYQ5 205 aa4.96□□□□□ -1.62
LMNA-208ENST00000448611 KRTAP12-4P60329 112 aa4.93□□□□□ -1.62
LMNA-208ENST00000448611 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
LMNA-208ENST00000448611 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.64
LMNA-208ENST00000448611 KRTAP20-2Q3LI61 65 aa4.82□□□□□ -1.64
LMNA-208ENST00000448611 MT3P25713 68 aa4.8□□□□□ -1.64
LMNA-208ENST00000448611 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
LMNA-208ENST00000448611 LCE3EQ5T5B0 92 aa4.66□□□□□ -1.66
LMNA-208ENST00000448611 KRTAP5-3Q6L8H2 238 aa4.64□□□□□ -1.67
LMNA-208ENST00000448611 KRTAP5-2Q701N4 177 aa4.6□□□□□ -1.67
LMNA-208ENST00000448611 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
LMNA-208ENST00000448611 AHNAK2Q8IVF2 5795 aa4.41□□□□□ -1.7
LMNA-208ENST00000448611 KRTAP5-10Q6L8G5 202 aa4.35□□□□□ -1.71
LMNA-208ENST00000448611 GPR98Q8WXG9 6306 aa4.3□□□□□ -1.72
LMNA-208ENST00000448611 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
LMNA-208ENST00000448611 PRM1P04553 51 aa4.19□□□□□ -1.74
LMNA-208ENST00000448611 KRTAP5-8O75690 187 aa4.11□□□□□ -1.75
LMNA-208ENST00000448611 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
LMNA-208ENST00000448611 KRTAP5-7Q6L8G8 165 aa4.09□□□□□ -1.76
LMNA-208ENST00000448611 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
LMNA-208ENST00000448611 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
LMNA-208ENST00000448611 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
LMNA-208ENST00000448611 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
LMNA-208ENST00000448611 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
LMNA-208ENST00000448611 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
LMNA-208ENST00000448611 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
LMNA-208ENST00000448611 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.83
LMNA-208ENST00000448611 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.85
LMNA-208ENST00000448611 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.87
LMNA-208ENST00000448611 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
LMNA-208ENST00000448611 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
LMNA-208ENST00000448611 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
LMNA-208ENST00000448611 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
LMNA-208ENST00000448611 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
LMNA-208ENST00000448611 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
LMNA-208ENST00000448611 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
LMNA-208ENST00000448611 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 8.8 ms