RNA–Protein interactions for RNA: ENST00000448582.6

FAM60A-202, Transcript of Protein FAM60A, humanhuman

TSL 1 (best)

Gene FAM60A, Length 3,111 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-202ENST00000448582 LPAP08519 4548 aa2.45□□□□□ -2.02
FAM60A-202ENST00000448582 LRP2P98164 4655 aa2.43□□□□□ -2.02
FAM60A-202ENST00000448582 KRTAP5-9P26371 169 aa2.42□□□□□ -2.02
FAM60A-202ENST00000448582 KRTAP19-6Q3LI70 58 aa2.39□□□□□ -2.03
FAM60A-202ENST00000448582 USH2AO75445 5202 aa2.38□□□□□ -2.03
FAM60A-202ENST00000448582 MT3P25713 68 aa2.35□□□□□ -2.03
FAM60A-202ENST00000448582 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
FAM60A-202ENST00000448582 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
FAM60A-202ENST00000448582 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
FAM60A-202ENST00000448582 KRTAP10-10P60014 251 aa2.31□□□□□ -2.04
FAM60A-202ENST00000448582 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
FAM60A-202ENST00000448582 KRTAP4-1Q9BYQ7 146 aa2.27□□□□□ -2.05
FAM60A-202ENST00000448582 KRTAP19-2Q3LHN2 52 aa2.25□□□□□ -2.05
FAM60A-202ENST00000448582 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
FAM60A-202ENST00000448582 FLGP20930 4061 aaPredicted RBP2.24□□□□□ -2.05
FAM60A-202ENST00000448582 SYNE2Q8WXH0 6885 aaKnown RBP2.22□□□□□ -2.05
FAM60A-202ENST00000448582 TNP1P09430 55 aa2.22□□□□□ -2.05
FAM60A-202ENST00000448582 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
FAM60A-202ENST00000448582 KMT2DO14686 5537 aa2.18□□□□□ -2.06
FAM60A-202ENST00000448582 FSIP2Q5CZC0 6907 aa2.18□□□□□ -2.06
FAM60A-202ENST00000448582 FCGBPQ9Y6R7 5405 aaPredicted RBP2.16□□□□□ -2.06
FAM60A-202ENST00000448582 MT1HP80294 61 aa2.15□□□□□ -2.07
FAM60A-202ENST00000448582 KRTAP10-12P60413 245 aa2.12□□□□□ -2.07
FAM60A-202ENST00000448582 KRTAP10-7P60409 375 aaPredicted RBP2.11□□□□□ -2.07
FAM60A-202ENST00000448582 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
FAM60A-202ENST00000448582 KRTAP10-5P60370 271 aa2.07□□□□□ -2.08
FAM60A-202ENST00000448582 SPRR2GQ9BYE4 73 aa2.06□□□□□ -2.08
FAM60A-202ENST00000448582 M0R2T5 61 aa2.02□□□□□ -2.09
FAM60A-202ENST00000448582 KRTAP8-1Q8IUC2 63 aa2.02□□□□□ -2.09
FAM60A-202ENST00000448582 MACF1Q9UPN3 7388 aaKnown RBP2.02□□□□□ -2.09
FAM60A-202ENST00000448582 LCE3AQ5TA76 89 aa2.01□□□□□ -2.09
FAM60A-202ENST00000448582 OBSCNQ5VST9 7968 aa2.01□□□□□ -2.09
FAM60A-202ENST00000448582 MT2AP02795 61 aa2□□□□□ -2.09
FAM60A-202ENST00000448582 MT1FP04733 61 aa2□□□□□ -2.09
FAM60A-202ENST00000448582 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
FAM60A-202ENST00000448582 KRTAP19-8Q3LI54 63 aa1.97□□□□□ -2.09
FAM60A-202ENST00000448582 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
FAM60A-202ENST00000448582 MT1BP07438 61 aa1.94□□□□□ -2.1
FAM60A-202ENST00000448582 SPRR2EP22531 72 aa1.93□□□□□ -2.1
FAM60A-202ENST00000448582 SPRR2DP22532 72 aa1.93□□□□□ -2.1
FAM60A-202ENST00000448582 SPRR2BP35325 72 aa1.93□□□□□ -2.1
FAM60A-202ENST00000448582 SPRR2AP35326 72 aa1.93□□□□□ -2.1
FAM60A-202ENST00000448582 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
FAM60A-202ENST00000448582 MT1XP80297 61 aa1.93□□□□□ -2.1
FAM60A-202ENST00000448582 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
FAM60A-202ENST00000448582 SYNE1Q8NF91 8797 aaKnown RBP1.91□□□□□ -2.1
FAM60A-202ENST00000448582 MDN1Q9NU22 5596 aa1.86□□□□□ -2.11
FAM60A-202ENST00000448582 KRTAP5-4Q6L8H1 288 aa1.86□□□□□ -2.11
FAM60A-202ENST00000448582 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
FAM60A-202ENST00000448582 KRTAP9-6A8MVA2 160 aa1.79□□□□□ -2.12
FAM60A-202ENST00000448582 KRTAP19-5Q3LI72 72 aa1.78□□□□□ -2.12
FAM60A-202ENST00000448582 KRTAP19-7Q3SYF9 63 aa1.72□□□□□ -2.13
FAM60A-202ENST00000448582 MUC12Q9UKN1 5478 aa1.7□□□□□ -2.14
FAM60A-202ENST00000448582 MT1EP04732 61 aa1.66□□□□□ -2.14
FAM60A-202ENST00000448582 MT1LQ93083 61 aa1.66□□□□□ -2.14
FAM60A-202ENST00000448582 SPRR2FQ96RM1 72 aa1.65□□□□□ -2.15
FAM60A-202ENST00000448582 DSTQ03001 7570 aaKnown RBP1.65□□□□□ -2.15
FAM60A-202ENST00000448582 PRM1P04553 51 aa1.64□□□□□ -2.15
FAM60A-202ENST00000448582 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
FAM60A-202ENST00000448582 KRTAP5-8O75690 187 aa1.6□□□□□ -2.15
FAM60A-202ENST00000448582 LCE1CQ5T751 118 aa1.58□□□□□ -2.16
FAM60A-202ENST00000448582 LCE1BQ5T7P3 118 aa1.58□□□□□ -2.16
FAM60A-202ENST00000448582 KRTAP19-3Q7Z4W3 81 aa1.56□□□□□ -2.16
FAM60A-202ENST00000448582 KRTAP4-3Q9BYR4 195 aa1.56□□□□□ -2.16
FAM60A-202ENST00000448582 MT1GP13640 62 aa1.55□□□□□ -2.16
FAM60A-202ENST00000448582 MT1MQ8N339 61 aa1.55□□□□□ -2.16
FAM60A-202ENST00000448582 KRTAP4-4Q9BYR3 166 aa1.55□□□□□ -2.16
FAM60A-202ENST00000448582 MT1AP04731 61 aa1.54□□□□□ -2.16
FAM60A-202ENST00000448582 KRTAP20-2Q3LI61 65 aa1.54□□□□□ -2.16
FAM60A-202ENST00000448582 KRTAP5-2Q701N4 177 aa1.54□□□□□ -2.16
FAM60A-202ENST00000448582 MT4P47944 62 aa1.44□□□□□ -2.18
FAM60A-202ENST00000448582 KRTAP5-5Q701N2 237 aaPredicted RBP1.44□□□□□ -2.18
FAM60A-202ENST00000448582 KRTAP6-1Q3LI64 71 aa1.41□□□□□ -2.18
FAM60A-202ENST00000448582 KRTAP6-2Q3LI66 62 aa1.35□□□□□ -2.19
FAM60A-202ENST00000448582 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
FAM60A-202ENST00000448582 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
FAM60A-202ENST00000448582 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
FAM60A-202ENST00000448582 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 70.1 ms