RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 KRTAP9-7A8MTY7 169 aa8.73□□□□□ -1.01
RFFL-206ENST00000447669 KRTAP4-7Q9BYR0 210 aa8.73□□□□□ -1.01
RFFL-206ENST00000447669 KRTAP19-3Q7Z4W3 81 aa8.73□□□□□ -1.01
RFFL-206ENST00000447669 LCE1AQ5T7P2 110 aa8.67□□□□□ -1.02
RFFL-206ENST00000447669 SPRR2EP22531 72 aa8.63□□□□□ -1.03
RFFL-206ENST00000447669 SPRR2BP35325 72 aa8.63□□□□□ -1.03
RFFL-206ENST00000447669 SPRR2AP35326 72 aa8.63□□□□□ -1.03
RFFL-206ENST00000447669 LCE3CQ5T5A8 94 aa8.63□□□□□ -1.03
RFFL-206ENST00000447669 LCE5AQ5TCM9 118 aa8.61□□□□□ -1.03
RFFL-206ENST00000447669 MT1GP13640 62 aa8.59□□□□□ -1.03
RFFL-206ENST00000447669 MT1MQ8N339 61 aa8.56□□□□□ -1.04
RFFL-206ENST00000447669 KRTAP4-3Q9BYR4 195 aa8.54□□□□□ -1.04
RFFL-206ENST00000447669 DSTQ03001 7570 aaKnown RBP8.43□□□□□ -1.06
RFFL-206ENST00000447669 KRTAP19-4Q3LI73 84 aa8.39□□□□□ -1.07
RFFL-206ENST00000447669 SPRR5A0A1B0GTR4 108 aa8.37□□□□□ -1.07
RFFL-206ENST00000447669 NEBP20929 6669 aa8.35□□□□□ -1.07
RFFL-206ENST00000447669 SPRR2DP22532 72 aa8.3□□□□□ -1.08
RFFL-206ENST00000447669 KRTAP9-6A8MVA2 160 aa8.28□□□□□ -1.08
RFFL-206ENST00000447669 LOC100996750A0A140TA64 210 aa8.2□□□□□ -1.1
RFFL-206ENST00000447669 LCE3BQ5TA77 95 aa7.99□□□□□ -1.13
RFFL-206ENST00000447669 LUZP6Q538Z0 58 aa7.96□□□□□ -1.13
RFFL-206ENST00000447669 NDUFAF8A1L188 74 aa7.79□□□□□ -1.16
RFFL-206ENST00000447669 KRTAP2-3P0C7H8 128 aa7.76□□□□□ -1.17
RFFL-206ENST00000447669 KRTAP2-4Q9BYR9 128 aa7.76□□□□□ -1.17
RFFL-206ENST00000447669 KRTAP5-5Q701N2 237 aaPredicted RBP7.71□□□□□ -1.17
RFFL-206ENST00000447669 KRTAP20-1Q3LI63 56 aa7.7□□□□□ -1.18
RFFL-206ENST00000447669 KRTAP2-2Q9BYT5 123 aa7.59□□□□□ -1.19
RFFL-206ENST00000447669 KRTAP2-1Q9BYU5 128 aa7.59□□□□□ -1.19
RFFL-206ENST00000447669 KRTAP6-1Q3LI64 71 aa7.52□□□□□ -1.2
RFFL-206ENST00000447669 MT1AP04731 61 aa7.48□□□□□ -1.21
RFFL-206ENST00000447669 H3BS24 57 aa7.44□□□□□ -1.22
RFFL-206ENST00000447669 SYNE1Q8NF91 8797 aaKnown RBP7.43□□□□□ -1.22
RFFL-206ENST00000447669 KRTAP5-4Q6L8H1 288 aa7.41□□□□□ -1.22
RFFL-206ENST00000447669 KRTAP4-9Q9BYQ8 210 aa7.32□□□□□ -1.24
RFFL-206ENST00000447669 MT4P47944 62 aa7.3□□□□□ -1.24
RFFL-206ENST00000447669 LCE4AQ5TA78 99 aa7.26□□□□□ -1.25
RFFL-206ENST00000447669 KRTAP4-6Q9BYQ5 205 aa7.23□□□□□ -1.25
RFFL-206ENST00000447669 KRTAP12-4P60329 112 aa7.16□□□□□ -1.26
RFFL-206ENST00000447669 LCE1DQ5T752 114 aa7.16□□□□□ -1.26
RFFL-206ENST00000447669 KRTAP9-4Q9BYQ2 154 aa7.15□□□□□ -1.27
RFFL-206ENST00000447669 HMCN1Q96RW7 5635 aa7.1□□□□□ -1.27
RFFL-206ENST00000447669 KRTAP20-2Q3LI61 65 aa6.99□□□□□ -1.29
RFFL-206ENST00000447669 KRTAP6-2Q3LI66 62 aa6.96□□□□□ -1.3
RFFL-206ENST00000447669 MT3P25713 68 aa6.77□□□□□ -1.33
RFFL-206ENST00000447669 KRTAP5-3Q6L8H2 238 aa6.73□□□□□ -1.33
RFFL-206ENST00000447669 KRTAP5-2Q701N4 177 aa6.69□□□□□ -1.34
RFFL-206ENST00000447669 OBSCNQ5VST9 7968 aa6.63□□□□□ -1.35
RFFL-206ENST00000447669 A0A0A0MQY5 61 aa6.6□□□□□ -1.35
RFFL-206ENST00000447669 LCE3DQ9BYE3 92 aa6.43□□□□□ -1.38
RFFL-206ENST00000447669 AHNAK2Q8IVF2 5795 aa6.32□□□□□ -1.4
RFFL-206ENST00000447669 LCE3EQ5T5B0 92 aa6.22□□□□□ -1.41
RFFL-206ENST00000447669 INE1O15225 51 aa6.2□□□□□ -1.42
RFFL-206ENST00000447669 KRTAP4-11Q9BYQ6 195 aa6.1□□□□□ -1.43
RFFL-206ENST00000447669 KRTAP5-10Q6L8G5 202 aa6□□□□□ -1.45
RFFL-206ENST00000447669 KRTAP5-8O75690 187 aa5.89□□□□□ -1.47
RFFL-206ENST00000447669 LCE1EQ5T753 118 aa5.87□□□□□ -1.47
RFFL-206ENST00000447669 KRTAP5-1Q6L8H4 278 aa5.87□□□□□ -1.47
RFFL-206ENST00000447669 GPR98Q8WXG9 6306 aa5.8□□□□□ -1.48
RFFL-206ENST00000447669 LCE1BQ5T7P3 118 aa5.69□□□□□ -1.5
RFFL-206ENST00000447669 MUC5ACP98088 5654 aa5.63□□□□□ -1.51
RFFL-206ENST00000447669 KRTAP4-2Q9BYR5 136 aa5.59□□□□□ -1.51
RFFL-206ENST00000447669 KRTAP5-7Q6L8G8 165 aa5.56□□□□□ -1.52
RFFL-206ENST00000447669 LCE1CQ5T751 118 aa5.5□□□□□ -1.53
RFFL-206ENST00000447669 PRM1P04553 51 aa5.41□□□□□ -1.54
RFFL-206ENST00000447669 KRTAP9-9Q9BYP9 154 aa5.3□□□□□ -1.56
RFFL-206ENST00000447669 MUC5BQ9HC84 5762 aaPredicted RBP5.19□□□□□ -1.58
RFFL-206ENST00000447669 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.09□□□□□ -1.59
RFFL-206ENST00000447669 KRTAP21-2Q3LI59 83 aa4.9□□□□□ -1.62
RFFL-206ENST00000447669 KRTAP5-11Q6L8G4 156 aa4.86□□□□□ -1.63
RFFL-206ENST00000447669 KRTAP4-12Q9BQ66 201 aa4.82□□□□□ -1.64
RFFL-206ENST00000447669 AHNAKQ09666 5890 aaKnown RBP4.75□□□□□ -1.65
RFFL-206ENST00000447669 KRTAP4-4Q9BYR3 166 aa4.51□□□□□ -1.69
RFFL-206ENST00000447669 LCE1FQ5T754 118 aa4.35□□□□□ -1.71
RFFL-206ENST00000447669 PHGR1C9JFL3 82 aa4.21□□□□□ -1.74
RFFL-206ENST00000447669 MUC19Q7Z5P9 8384 aa3.95□□□□□ -1.78
RFFL-206ENST00000447669 KRTAP21-1Q3LI58 79 aa3.2□□□□□ -1.9
RFFL-206ENST00000447669 MUC16Q8WXI7 14507 aa2.67□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms