RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 MT2AP02795 61 aa3.3□□□□□ -1.88
TRIM4-204ENST00000447480 PRO2289Q9P1D8 64 aa3.3□□□□□ -1.88
TRIM4-204ENST00000447480 KRTAP10-5P60370 271 aa3.29□□□□□ -1.88
TRIM4-204ENST00000447480 MT1FP04733 61 aa3.26□□□□□ -1.89
TRIM4-204ENST00000447480 KRTAP10-12P60413 245 aa3.26□□□□□ -1.89
TRIM4-204ENST00000447480 SPRR2GQ9BYE4 73 aa3.22□□□□□ -1.89
TRIM4-204ENST00000447480 KRTAP19-8Q3LI54 63 aa3.15□□□□□ -1.91
TRIM4-204ENST00000447480 KRTAP8-1Q8IUC2 63 aa3.13□□□□□ -1.91
TRIM4-204ENST00000447480 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
TRIM4-204ENST00000447480 CRCT1Q9UGL9 99 aa3.11□□□□□ -1.91
TRIM4-204ENST00000447480 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
TRIM4-204ENST00000447480 KRTAP19-6Q3LI70 58 aa3.06□□□□□ -1.92
TRIM4-204ENST00000447480 MT1BP07438 61 aa3.04□□□□□ -1.92
TRIM4-204ENST00000447480 FSIP2Q5CZC0 6907 aa3.03□□□□□ -1.92
TRIM4-204ENST00000447480 LCE3AQ5TA76 89 aa3.01□□□□□ -1.93
TRIM4-204ENST00000447480 USH2AO75445 5202 aa3.01□□□□□ -1.93
TRIM4-204ENST00000447480 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
TRIM4-204ENST00000447480 KRTAP12-3P60328 96 aa2.96□□□□□ -1.94
TRIM4-204ENST00000447480 SSPOA2VEC9 5147 aa2.95□□□□□ -1.94
TRIM4-204ENST00000447480 MT1XP80297 61 aa2.91□□□□□ -1.94
TRIM4-204ENST00000447480 FCGBPQ9Y6R7 5405 aaPredicted RBP2.87□□□□□ -1.95
TRIM4-204ENST00000447480 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
TRIM4-204ENST00000447480 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
TRIM4-204ENST00000447480 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
TRIM4-204ENST00000447480 MACF1Q9UPN3 7388 aaKnown RBP2.81□□□□□ -1.96
TRIM4-204ENST00000447480 KRTAP6-3Q3LI67 103 aa2.79□□□□□ -1.96
TRIM4-204ENST00000447480 KRTAP2-3P0C7H8 128 aa2.76□□□□□ -1.97
TRIM4-204ENST00000447480 KRTAP2-4Q9BYR9 128 aa2.76□□□□□ -1.97
TRIM4-204ENST00000447480 KRTAP2-1Q9BYU5 128 aa2.76□□□□□ -1.97
TRIM4-204ENST00000447480 KRTAP5-9P26371 169 aa2.74□□□□□ -1.97
TRIM4-204ENST00000447480 SYNE2Q8WXH0 6885 aaKnown RBP2.72□□□□□ -1.97
TRIM4-204ENST00000447480 SPRR2FQ96RM1 72 aa2.71□□□□□ -1.98
TRIM4-204ENST00000447480 KRTAP19-5Q3LI72 72 aa2.68□□□□□ -1.98
TRIM4-204ENST00000447480 KMT2DO14686 5537 aa2.63□□□□□ -1.99
TRIM4-204ENST00000447480 SPRR2EP22531 72 aa2.62□□□□□ -1.99
TRIM4-204ENST00000447480 SPRR2BP35325 72 aa2.62□□□□□ -1.99
TRIM4-204ENST00000447480 SPRR2AP35326 72 aa2.62□□□□□ -1.99
TRIM4-204ENST00000447480 MT1EP04732 61 aa2.6□□□□□ -1.99
TRIM4-204ENST00000447480 KRTAP19-7Q3SYF9 63 aa2.59□□□□□ -1.99
TRIM4-204ENST00000447480 OBSCNQ5VST9 7968 aa2.59□□□□□ -2
TRIM4-204ENST00000447480 MT1GP13640 62 aa2.58□□□□□ -2
TRIM4-204ENST00000447480 KRTAP19-3Q7Z4W3 81 aa2.57□□□□□ -2
TRIM4-204ENST00000447480 KRTAP4-3Q9BYR4 195 aa2.57□□□□□ -2
TRIM4-204ENST00000447480 MUC12Q9UKN1 5478 aa2.55□□□□□ -2
TRIM4-204ENST00000447480 SPRR2DP22532 72 aa2.54□□□□□ -2
TRIM4-204ENST00000447480 NEBP20929 6669 aa2.54□□□□□ -2
TRIM4-204ENST00000447480 MT1LQ93083 61 aa2.53□□□□□ -2
TRIM4-204ENST00000447480 MDN1Q9NU22 5596 aa2.51□□□□□ -2.01
TRIM4-204ENST00000447480 KRTAP20-1Q3LI63 56 aa2.49□□□□□ -2.01
TRIM4-204ENST00000447480 MT1MQ8N339 61 aa2.45□□□□□ -2.02
TRIM4-204ENST00000447480 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
TRIM4-204ENST00000447480 KRTAP12-4P60329 112 aa2.4□□□□□ -2.03
TRIM4-204ENST00000447480 MT1AP04731 61 aa2.39□□□□□ -2.03
TRIM4-204ENST00000447480 DSTQ03001 7570 aaKnown RBP2.34□□□□□ -2.04
TRIM4-204ENST00000447480 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
TRIM4-204ENST00000447480 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
TRIM4-204ENST00000447480 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
TRIM4-204ENST00000447480 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
TRIM4-204ENST00000447480 MT4P47944 62 aa2.15□□□□□ -2.07
TRIM4-204ENST00000447480 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
TRIM4-204ENST00000447480 PRM1P04553 51 aa2.09□□□□□ -2.07
TRIM4-204ENST00000447480 KRTAP20-2Q3LI61 65 aa2.08□□□□□ -2.08
TRIM4-204ENST00000447480 KRTAP6-1Q3LI64 71 aa2.08□□□□□ -2.08
TRIM4-204ENST00000447480 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
TRIM4-204ENST00000447480 SYNE1Q8NF91 8797 aaKnown RBP2.05□□□□□ -2.08
TRIM4-204ENST00000447480 KRTAP6-2Q3LI66 62 aa1.98□□□□□ -2.09
TRIM4-204ENST00000447480 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
TRIM4-204ENST00000447480 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
TRIM4-204ENST00000447480 KRTAP5-10Q6L8G5 202 aa1.88□□□□□ -2.11
TRIM4-204ENST00000447480 AHNAK2Q8IVF2 5795 aa1.88□□□□□ -2.11
TRIM4-204ENST00000447480 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
TRIM4-204ENST00000447480 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
TRIM4-204ENST00000447480 MUC5ACP98088 5654 aa1.63□□□□□ -2.15
TRIM4-204ENST00000447480 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
TRIM4-204ENST00000447480 MUC5BQ9HC84 5762 aaPredicted RBP1.55□□□□□ -2.16
TRIM4-204ENST00000447480 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
TRIM4-204ENST00000447480 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
TRIM4-204ENST00000447480 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 73.3 ms