RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 Q1T7F1 81 aa4.52□□□□□ -1.69
RFC4-208ENST00000447345 C10orf95Q9H7T3 257 aa4.52□□□□□ -1.69
RFC4-208ENST00000447345 SPRR2DP22532 72 aa4.48□□□□□ -1.69
RFC4-208ENST00000447345 TNP1P09430 55 aa4.46□□□□□ -1.7
RFC4-208ENST00000447345 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
RFC4-208ENST00000447345 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
RFC4-208ENST00000447345 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
RFC4-208ENST00000447345 MT1EP04732 61 aa4.43□□□□□ -1.7
RFC4-208ENST00000447345 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
RFC4-208ENST00000447345 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
RFC4-208ENST00000447345 A6NED7 52 aa4.41□□□□□ -1.7
RFC4-208ENST00000447345 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
RFC4-208ENST00000447345 K7ERS5 55 aa4.4□□□□□ -1.71
RFC4-208ENST00000447345 RPS28P62857 69 aaKnown RBP4.4□□□□□ -1.71
RFC4-208ENST00000447345 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
RFC4-208ENST00000447345 KRTAP19-3Q7Z4W3 81 aa4.35□□□□□ -1.71
RFC4-208ENST00000447345 KRTAP2-2Q9BYT5 123 aa4.31□□□□□ -1.72
RFC4-208ENST00000447345 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
RFC4-208ENST00000447345 KRTAP25-1Q3LHN0 102 aa4.27□□□□□ -1.73
RFC4-208ENST00000447345 MT1LQ93083 61 aa4.26□□□□□ -1.73
RFC4-208ENST00000447345 MT1GP13640 62 aa4.23□□□□□ -1.73
RFC4-208ENST00000447345 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
RFC4-208ENST00000447345 KRTAP12-3P60328 96 aa4.22□□□□□ -1.73
RFC4-208ENST00000447345 PP632Q6XCG6 107 aa4.22□□□□□ -1.73
RFC4-208ENST00000447345 MT1MQ8N339 61 aa4.21□□□□□ -1.74
RFC4-208ENST00000447345 CDC42SE1Q9NRR8 79 aa4.2□□□□□ -1.74
RFC4-208ENST00000447345 PRAC1Q96KF2 57 aa4.17□□□□□ -1.74
RFC4-208ENST00000447345 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
RFC4-208ENST00000447345 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
RFC4-208ENST00000447345 ROMO1P60602 79 aa4.13□□□□□ -1.75
RFC4-208ENST00000447345 KRTAP15-1Q3LI76 137 aa4.05□□□□□ -1.76
RFC4-208ENST00000447345 BRK1Q8WUW1 75 aa3.98□□□□□ -1.77
RFC4-208ENST00000447345 PRO0628Q9UI54 55 aa3.95□□□□□ -1.78
RFC4-208ENST00000447345 MT4P47944 62 aa3.93□□□□□ -1.78
RFC4-208ENST00000447345 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
RFC4-208ENST00000447345 KRTAP5-4Q6L8H1 288 aa3.87□□□□□ -1.79
RFC4-208ENST00000447345 HMCN1Q96RW7 5635 aa3.83□□□□□ -1.8
RFC4-208ENST00000447345 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
RFC4-208ENST00000447345 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
RFC4-208ENST00000447345 PMAIP1Q13794 54 aa3.71□□□□□ -1.82
RFC4-208ENST00000447345 NDUFAF8A1L188 74 aa3.69□□□□□ -1.82
RFC4-208ENST00000447345 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
RFC4-208ENST00000447345 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
RFC4-208ENST00000447345 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
RFC4-208ENST00000447345 KRTAP12-4P60329 112 aa3.67□□□□□ -1.82
RFC4-208ENST00000447345 AHNAK2Q8IVF2 5795 aa3.64□□□□□ -1.83
RFC4-208ENST00000447345 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
RFC4-208ENST00000447345 KTN1-AS1Q86SY8 53 aa3.63□□□□□ -1.83
RFC4-208ENST00000447345 MT1AP04731 61 aa3.62□□□□□ -1.83
RFC4-208ENST00000447345 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
RFC4-208ENST00000447345 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
RFC4-208ENST00000447345 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
RFC4-208ENST00000447345 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
RFC4-208ENST00000447345 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
RFC4-208ENST00000447345 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
RFC4-208ENST00000447345 MT3P25713 68 aa3.29□□□□□ -1.88
RFC4-208ENST00000447345 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
RFC4-208ENST00000447345 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
RFC4-208ENST00000447345 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
RFC4-208ENST00000447345 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
RFC4-208ENST00000447345 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
RFC4-208ENST00000447345 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
RFC4-208ENST00000447345 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
RFC4-208ENST00000447345 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
RFC4-208ENST00000447345 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
RFC4-208ENST00000447345 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
RFC4-208ENST00000447345 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
RFC4-208ENST00000447345 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
RFC4-208ENST00000447345 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
RFC4-208ENST00000447345 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
RFC4-208ENST00000447345 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
RFC4-208ENST00000447345 INE1O15225 51 aa2.43□□□□□ -2.02
RFC4-208ENST00000447345 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
RFC4-208ENST00000447345 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
RFC4-208ENST00000447345 PRM1P04553 51 aa2.15□□□□□ -2.07
RFC4-208ENST00000447345 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
RFC4-208ENST00000447345 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
RFC4-208ENST00000447345 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 928.9 ms