RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 PP632Q6XCG6 107 aa5.64□□□□□ -1.51
SPTLC1P1-201ENST00000447199 A0A1B0GU69 56 aa5.63□□□□□ -1.51
SPTLC1P1-201ENST00000447199 A8MU10 97 aa5.63□□□□□ -1.51
SPTLC1P1-201ENST00000447199 HMCN1Q96RW7 5635 aa5.59□□□□□ -1.51
SPTLC1P1-201ENST00000447199 LCE3AQ5TA76 89 aa5.58□□□□□ -1.52
SPTLC1P1-201ENST00000447199 C10orf95Q9H7T3 257 aa5.57□□□□□ -1.52
SPTLC1P1-201ENST00000447199 TNP1P09430 55 aa5.53□□□□□ -1.52
SPTLC1P1-201ENST00000447199 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
SPTLC1P1-201ENST00000447199 MT4P47944 62 aa5.5□□□□□ -1.53
SPTLC1P1-201ENST00000447199 KRTAP5-4Q6L8H1 288 aa5.49□□□□□ -1.53
SPTLC1P1-201ENST00000447199 ANAPC13Q9BS18 74 aa5.48□□□□□ -1.53
SPTLC1P1-201ENST00000447199 CCDC179H3BU77 68 aa5.42□□□□□ -1.54
SPTLC1P1-201ENST00000447199 PRR15LQ9BU68 103 aa5.4□□□□□ -1.54
SPTLC1P1-201ENST00000447199 LINC01558Q9Y6Z2 57 aa5.38□□□□□ -1.55
SPTLC1P1-201ENST00000447199 AHNAK2Q8IVF2 5795 aa5.37□□□□□ -1.55
SPTLC1P1-201ENST00000447199 ATP5EP56381 51 aaPredicted RBP5.37□□□□□ -1.55
SPTLC1P1-201ENST00000447199 KRTAP12-3P60328 96 aa5.36□□□□□ -1.55
SPTLC1P1-201ENST00000447199 KRTAP5-10Q6L8G5 202 aa5.3□□□□□ -1.56
SPTLC1P1-201ENST00000447199 UQCR11O14957 56 aa5.25□□□□□ -1.57
SPTLC1P1-201ENST00000447199 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
SPTLC1P1-201ENST00000447199 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
SPTLC1P1-201ENST00000447199 TMEM258P61165 79 aa5.18□□□□□ -1.58
SPTLC1P1-201ENST00000447199 KRTAP20-2Q3LI61 65 aa5.17□□□□□ -1.58
SPTLC1P1-201ENST00000447199 KRTAP25-1Q3LHN0 102 aa5.16□□□□□ -1.58
SPTLC1P1-201ENST00000447199 SPRR5A0A1B0GTR4 108 aa5.12□□□□□ -1.59
SPTLC1P1-201ENST00000447199 MIR22HGQ0VDD5 57 aa5.11□□□□□ -1.59
SPTLC1P1-201ENST00000447199 KRTAP5-7Q6L8G8 165 aa5.1□□□□□ -1.59
SPTLC1P1-201ENST00000447199 KRTAP23-1A1A580 65 aa5.09□□□□□ -1.59
SPTLC1P1-201ENST00000447199 SYNE1Q8NF91 8797 aaKnown RBP5.09□□□□□ -1.59
SPTLC1P1-201ENST00000447199 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
SPTLC1P1-201ENST00000447199 K7ERS5 55 aa4.99□□□□□ -1.61
SPTLC1P1-201ENST00000447199 PSPHP1O15172 72 aa4.94□□□□□ -1.62
SPTLC1P1-201ENST00000447199 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
SPTLC1P1-201ENST00000447199 Q1T7F1 81 aa4.92□□□□□ -1.62
SPTLC1P1-201ENST00000447199 V9GYY9 64 aa4.92□□□□□ -1.62
SPTLC1P1-201ENST00000447199 MT1AP04731 61 aa4.8□□□□□ -1.64
SPTLC1P1-201ENST00000447199 KRTAP5-2Q701N4 177 aa4.79□□□□□ -1.64
SPTLC1P1-201ENST00000447199 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
SPTLC1P1-201ENST00000447199 CDC42SE1Q9NRR8 79 aa4.75□□□□□ -1.65
SPTLC1P1-201ENST00000447199 A6NED7 52 aa4.74□□□□□ -1.65
SPTLC1P1-201ENST00000447199 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.66
SPTLC1P1-201ENST00000447199 ROMO1P60602 79 aa4.68□□□□□ -1.66
SPTLC1P1-201ENST00000447199 RPS28P62857 69 aaKnown RBP4.63□□□□□ -1.67
SPTLC1P1-201ENST00000447199 KRTAP5-8O75690 187 aa4.6□□□□□ -1.67
SPTLC1P1-201ENST00000447199 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
SPTLC1P1-201ENST00000447199 OBSCNQ5VST9 7968 aa4.55□□□□□ -1.68
SPTLC1P1-201ENST00000447199 MUC5BQ9HC84 5762 aaPredicted RBP4.5□□□□□ -1.69
SPTLC1P1-201ENST00000447199 MUC5ACP98088 5654 aa4.46□□□□□ -1.7
SPTLC1P1-201ENST00000447199 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.44□□□□□ -1.7
SPTLC1P1-201ENST00000447199 AHNAKQ09666 5890 aaKnown RBP4.42□□□□□ -1.7
SPTLC1P1-201ENST00000447199 KRTAP5-11Q6L8G4 156 aa4.38□□□□□ -1.71
SPTLC1P1-201ENST00000447199 MT3P25713 68 aa4.37□□□□□ -1.71
SPTLC1P1-201ENST00000447199 KRTAP5-1Q6L8H4 278 aa4.31□□□□□ -1.72
SPTLC1P1-201ENST00000447199 PCP4P48539 62 aa4.25□□□□□ -1.73
SPTLC1P1-201ENST00000447199 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
SPTLC1P1-201ENST00000447199 BRK1Q8WUW1 75 aa3.88□□□□□ -1.79
SPTLC1P1-201ENST00000447199 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
SPTLC1P1-201ENST00000447199 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
SPTLC1P1-201ENST00000447199 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
SPTLC1P1-201ENST00000447199 PMAIP1Q13794 54 aa3.63□□□□□ -1.83
SPTLC1P1-201ENST00000447199 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
SPTLC1P1-201ENST00000447199 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
SPTLC1P1-201ENST00000447199 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
SPTLC1P1-201ENST00000447199 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
SPTLC1P1-201ENST00000447199 PRO0628Q9UI54 55 aa3.2□□□□□ -1.9
SPTLC1P1-201ENST00000447199 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
SPTLC1P1-201ENST00000447199 KTN1-AS1Q86SY8 53 aa3.12□□□□□ -1.91
SPTLC1P1-201ENST00000447199 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
SPTLC1P1-201ENST00000447199 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
SPTLC1P1-201ENST00000447199 LUZP6Q538Z0 58 aa2.99□□□□□ -1.93
SPTLC1P1-201ENST00000447199 SVIPQ8NHG7 77 aa2.97□□□□□ -1.93
SPTLC1P1-201ENST00000447199 NDUFAF8A1L188 74 aa2.84□□□□□ -1.95
SPTLC1P1-201ENST00000447199 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
SPTLC1P1-201ENST00000447199 PRM1P04553 51 aa2.39□□□□□ -2.03
SPTLC1P1-201ENST00000447199 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
SPTLC1P1-201ENST00000447199 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
SPTLC1P1-201ENST00000447199 INE1O15225 51 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms