RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 MT1EP04732 61 aa4.21□□□□□ -1.74
CDCA3-203ENST00000446553 KRTAP19-3Q7Z4W3 81 aa4.2□□□□□ -1.74
CDCA3-203ENST00000446553 MT1GP13640 62 aa4.11□□□□□ -1.75
CDCA3-203ENST00000446553 PMAIP1Q13794 54 aa4.09□□□□□ -1.75
CDCA3-203ENST00000446553 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
CDCA3-203ENST00000446553 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
CDCA3-203ENST00000446553 ROMO1P60602 79 aa4.06□□□□□ -1.76
CDCA3-203ENST00000446553 C10orf95Q9H7T3 257 aa4.06□□□□□ -1.76
CDCA3-203ENST00000446553 GPR98Q8WXG9 6306 aa4.04□□□□□ -1.76
CDCA3-203ENST00000446553 TNP1P09430 55 aa4.02□□□□□ -1.77
CDCA3-203ENST00000446553 MT1MQ8N339 61 aa4.01□□□□□ -1.77
CDCA3-203ENST00000446553 MT1LQ93083 61 aa4.01□□□□□ -1.77
CDCA3-203ENST00000446553 KRTAP25-1Q3LHN0 102 aa4□□□□□ -1.77
CDCA3-203ENST00000446553 KRTAP4-9Q9BYQ8 210 aa3.99□□□□□ -1.77
CDCA3-203ENST00000446553 HMCN1Q96RW7 5635 aa3.98□□□□□ -1.77
CDCA3-203ENST00000446553 LCE3AQ5TA76 89 aa3.97□□□□□ -1.77
CDCA3-203ENST00000446553 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
CDCA3-203ENST00000446553 KTN1-AS1Q86SY8 53 aa3.97□□□□□ -1.77
CDCA3-203ENST00000446553 SVIPQ8NHG7 77 aa3.96□□□□□ -1.78
CDCA3-203ENST00000446553 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
CDCA3-203ENST00000446553 KRTAP23-1A1A580 65 aa3.9□□□□□ -1.79
CDCA3-203ENST00000446553 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.79
CDCA3-203ENST00000446553 AHNAK2Q8IVF2 5795 aa3.85□□□□□ -1.79
CDCA3-203ENST00000446553 MT4P47944 62 aa3.85□□□□□ -1.79
CDCA3-203ENST00000446553 KRTAP12-3P60328 96 aa3.85□□□□□ -1.79
CDCA3-203ENST00000446553 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
CDCA3-203ENST00000446553 PRAC1Q96KF2 57 aa3.78□□□□□ -1.8
CDCA3-203ENST00000446553 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
CDCA3-203ENST00000446553 KRTAP4-6Q9BYQ5 205 aa3.76□□□□□ -1.81
CDCA3-203ENST00000446553 KRTAP4-7Q9BYR0 210 aa3.75□□□□□ -1.81
CDCA3-203ENST00000446553 KRTAP5-10Q6L8G5 202 aa3.71□□□□□ -1.82
CDCA3-203ENST00000446553 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
CDCA3-203ENST00000446553 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
CDCA3-203ENST00000446553 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.83
CDCA3-203ENST00000446553 KRTAP12-4P60329 112 aa3.63□□□□□ -1.83
CDCA3-203ENST00000446553 KRTAP5-3Q6L8H2 238 aa3.61□□□□□ -1.83
CDCA3-203ENST00000446553 KRTAP15-1Q3LI76 137 aa3.6□□□□□ -1.83
CDCA3-203ENST00000446553 KRTAP5-7Q6L8G8 165 aa3.6□□□□□ -1.83
CDCA3-203ENST00000446553 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
CDCA3-203ENST00000446553 LOC100996750A0A140TA64 210 aa3.56□□□□□ -1.84
CDCA3-203ENST00000446553 LCE3CQ5T5A8 94 aa3.54□□□□□ -1.84
CDCA3-203ENST00000446553 MT1AP04731 61 aa3.43□□□□□ -1.86
CDCA3-203ENST00000446553 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
CDCA3-203ENST00000446553 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
CDCA3-203ENST00000446553 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
CDCA3-203ENST00000446553 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
CDCA3-203ENST00000446553 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
CDCA3-203ENST00000446553 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
CDCA3-203ENST00000446553 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
CDCA3-203ENST00000446553 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
CDCA3-203ENST00000446553 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
CDCA3-203ENST00000446553 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
CDCA3-203ENST00000446553 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
CDCA3-203ENST00000446553 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
CDCA3-203ENST00000446553 MT3P25713 68 aa3.15□□□□□ -1.91
CDCA3-203ENST00000446553 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
CDCA3-203ENST00000446553 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
CDCA3-203ENST00000446553 NDUFAF8A1L188 74 aa3.03□□□□□ -1.92
CDCA3-203ENST00000446553 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
CDCA3-203ENST00000446553 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
CDCA3-203ENST00000446553 A0A0A0MQY5 61 aa2.72□□□□□ -1.97
CDCA3-203ENST00000446553 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
CDCA3-203ENST00000446553 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
CDCA3-203ENST00000446553 H3BS24 57 aa2.66□□□□□ -1.98
CDCA3-203ENST00000446553 INE1O15225 51 aa2.59□□□□□ -1.99
CDCA3-203ENST00000446553 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
CDCA3-203ENST00000446553 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
CDCA3-203ENST00000446553 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.49□□□□□ -2.01
CDCA3-203ENST00000446553 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
CDCA3-203ENST00000446553 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
CDCA3-203ENST00000446553 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
CDCA3-203ENST00000446553 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
CDCA3-203ENST00000446553 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
CDCA3-203ENST00000446553 PRM1P04553 51 aa2.07□□□□□ -2.08
CDCA3-203ENST00000446553 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
CDCA3-203ENST00000446553 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
CDCA3-203ENST00000446553 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
CDCA3-203ENST00000446553 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 76.6 ms