RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
SEC13-213ENST00000445064 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
SEC13-213ENST00000445064 A8MU10 97 aa5.33□□□□□ -1.56
SEC13-213ENST00000445064 SMIM26A0A096LP01 95 aa5.32□□□□□ -1.56
SEC13-213ENST00000445064 TNP1P09430 55 aa5.3□□□□□ -1.56
SEC13-213ENST00000445064 KRTAP5-10Q6L8G5 202 aa5.3□□□□□ -1.56
SEC13-213ENST00000445064 A0A1B0GU69 56 aa5.29□□□□□ -1.56
SEC13-213ENST00000445064 TMEM258P61165 79 aa5.29□□□□□ -1.56
SEC13-213ENST00000445064 AHNAK2Q8IVF2 5795 aa5.27□□□□□ -1.57
SEC13-213ENST00000445064 ATP5EP56381 51 aaPredicted RBP5.26□□□□□ -1.57
SEC13-213ENST00000445064 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
SEC13-213ENST00000445064 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
SEC13-213ENST00000445064 KRTAP12-3P60328 96 aa5.14□□□□□ -1.59
SEC13-213ENST00000445064 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
SEC13-213ENST00000445064 KRTAP5-7Q6L8G8 165 aa5.12□□□□□ -1.59
SEC13-213ENST00000445064 KRTAP20-2Q3LI61 65 aa5.09□□□□□ -1.59
SEC13-213ENST00000445064 A0A0A0MQY5 61 aa5.08□□□□□ -1.6
SEC13-213ENST00000445064 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
SEC13-213ENST00000445064 PRR15LQ9BU68 103 aa5.03□□□□□ -1.6
SEC13-213ENST00000445064 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
SEC13-213ENST00000445064 RPS28P62857 69 aaKnown RBP5.01□□□□□ -1.61
SEC13-213ENST00000445064 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
SEC13-213ENST00000445064 LOC100996750A0A140TA64 210 aa4.97□□□□□ -1.61
SEC13-213ENST00000445064 LINC01558Q9Y6Z2 57 aa4.94□□□□□ -1.62
SEC13-213ENST00000445064 V9GYY9 64 aa4.91□□□□□ -1.62
SEC13-213ENST00000445064 Q1T7F1 81 aa4.89□□□□□ -1.63
SEC13-213ENST00000445064 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
SEC13-213ENST00000445064 UQCR11O14957 56 aa4.87□□□□□ -1.63
SEC13-213ENST00000445064 KRTAP25-1Q3LHN0 102 aa4.86□□□□□ -1.63
SEC13-213ENST00000445064 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
SEC13-213ENST00000445064 PSPHP1O15172 72 aa4.85□□□□□ -1.63
SEC13-213ENST00000445064 MIR22HGQ0VDD5 57 aa4.75□□□□□ -1.65
SEC13-213ENST00000445064 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
SEC13-213ENST00000445064 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
SEC13-213ENST00000445064 A6NED7 52 aa4.71□□□□□ -1.66
SEC13-213ENST00000445064 KRTAP4-11Q9BYQ6 195 aa4.7□□□□□ -1.66
SEC13-213ENST00000445064 K7ERS5 55 aa4.68□□□□□ -1.66
SEC13-213ENST00000445064 KRTAP6-1Q3LI64 71 aa4.65□□□□□ -1.67
SEC13-213ENST00000445064 KRTAP5-2Q701N4 177 aa4.65□□□□□ -1.67
SEC13-213ENST00000445064 MT1AP04731 61 aa4.64□□□□□ -1.67
SEC13-213ENST00000445064 CDC42SE1Q9NRR8 79 aa4.58□□□□□ -1.68
SEC13-213ENST00000445064 KRTAP5-8O75690 187 aa4.56□□□□□ -1.68
SEC13-213ENST00000445064 BRK1Q8WUW1 75 aa4.54□□□□□ -1.68
SEC13-213ENST00000445064 KRTAP9-4Q9BYQ2 154 aa4.53□□□□□ -1.68
SEC13-213ENST00000445064 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
SEC13-213ENST00000445064 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
SEC13-213ENST00000445064 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
SEC13-213ENST00000445064 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
SEC13-213ENST00000445064 KRTAP9-9Q9BYP9 154 aa4.36□□□□□ -1.71
SEC13-213ENST00000445064 AHNAKQ09666 5890 aaKnown RBP4.34□□□□□ -1.72
SEC13-213ENST00000445064 ROMO1P60602 79 aa4.33□□□□□ -1.72
SEC13-213ENST00000445064 MUC5BQ9HC84 5762 aaPredicted RBP4.33□□□□□ -1.72
SEC13-213ENST00000445064 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
SEC13-213ENST00000445064 PRO0628Q9UI54 55 aa4.32□□□□□ -1.72
SEC13-213ENST00000445064 PMAIP1Q13794 54 aa4.27□□□□□ -1.73
SEC13-213ENST00000445064 MT3P25713 68 aa4.26□□□□□ -1.73
SEC13-213ENST00000445064 KRTAP5-1Q6L8H4 278 aa4.24□□□□□ -1.73
SEC13-213ENST00000445064 PRAC1Q96KF2 57 aa4.2□□□□□ -1.74
SEC13-213ENST00000445064 KTN1-AS1Q86SY8 53 aa4.04□□□□□ -1.76
SEC13-213ENST00000445064 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
SEC13-213ENST00000445064 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
SEC13-213ENST00000445064 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
SEC13-213ENST00000445064 KRTAP4-2Q9BYR5 136 aa3.78□□□□□ -1.8
SEC13-213ENST00000445064 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
SEC13-213ENST00000445064 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
SEC13-213ENST00000445064 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
SEC13-213ENST00000445064 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
SEC13-213ENST00000445064 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
SEC13-213ENST00000445064 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
SEC13-213ENST00000445064 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
SEC13-213ENST00000445064 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
SEC13-213ENST00000445064 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
SEC13-213ENST00000445064 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
SEC13-213ENST00000445064 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
SEC13-213ENST00000445064 INE1O15225 51 aa2.55□□□□□ -2
SEC13-213ENST00000445064 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
SEC13-213ENST00000445064 PRM1P04553 51 aa2.23□□□□□ -2.05
SEC13-213ENST00000445064 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 39.4 ms