RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 LCE5AQ5TCM9 118 aa6.35□□□□□ -1.39
SMARCAL1-209ENST00000444508 LCE3BQ5TA77 95 aa6.34□□□□□ -1.39
SMARCAL1-209ENST00000444508 KRTAP25-1Q3LHN0 102 aa6.31□□□□□ -1.4
SMARCAL1-209ENST00000444508 MT1GP13640 62 aa6.26□□□□□ -1.41
SMARCAL1-209ENST00000444508 PP632Q6XCG6 107 aa6.24□□□□□ -1.41
SMARCAL1-209ENST00000444508 MT1LQ93083 61 aa6.22□□□□□ -1.41
SMARCAL1-209ENST00000444508 KRTAP12-3P60328 96 aa6.19□□□□□ -1.42
SMARCAL1-209ENST00000444508 CDC42SE1Q9NRR8 79 aa6.18□□□□□ -1.42
SMARCAL1-209ENST00000444508 DSTQ03001 7570 aaKnown RBP6.16□□□□□ -1.42
SMARCAL1-209ENST00000444508 MT1MQ8N339 61 aa6.15□□□□□ -1.42
SMARCAL1-209ENST00000444508 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
SMARCAL1-209ENST00000444508 ROMO1P60602 79 aa6.08□□□□□ -1.44
SMARCAL1-209ENST00000444508 KRTAP4-3Q9BYR4 195 aa5.98□□□□□ -1.45
SMARCAL1-209ENST00000444508 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
SMARCAL1-209ENST00000444508 KRTAP19-4Q3LI73 84 aa5.87□□□□□ -1.47
SMARCAL1-209ENST00000444508 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
SMARCAL1-209ENST00000444508 KRTAP4-9Q9BYQ8 210 aa5.83□□□□□ -1.48
SMARCAL1-209ENST00000444508 GPR98Q8WXG9 6306 aa5.81□□□□□ -1.48
SMARCAL1-209ENST00000444508 LCE4AQ5TA78 99 aa5.8□□□□□ -1.48
SMARCAL1-209ENST00000444508 BRK1Q8WUW1 75 aa5.79□□□□□ -1.48
SMARCAL1-209ENST00000444508 LCE3CQ5T5A8 94 aa5.72□□□□□ -1.49
SMARCAL1-209ENST00000444508 LCE1DQ5T752 114 aa5.72□□□□□ -1.49
SMARCAL1-209ENST00000444508 HMCN1Q96RW7 5635 aa5.71□□□□□ -1.49
SMARCAL1-209ENST00000444508 MT4P47944 62 aa5.7□□□□□ -1.5
SMARCAL1-209ENST00000444508 KRTAP5-4Q6L8H1 288 aa5.7□□□□□ -1.5
SMARCAL1-209ENST00000444508 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.51
SMARCAL1-209ENST00000444508 KRTAP5-5Q701N2 237 aaPredicted RBP5.59□□□□□ -1.51
SMARCAL1-209ENST00000444508 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
SMARCAL1-209ENST00000444508 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
SMARCAL1-209ENST00000444508 PMAIP1Q13794 54 aa5.45□□□□□ -1.54
SMARCAL1-209ENST00000444508 AHNAK2Q8IVF2 5795 aa5.42□□□□□ -1.54
SMARCAL1-209ENST00000444508 SPRR5A0A1B0GTR4 108 aa5.4□□□□□ -1.54
SMARCAL1-209ENST00000444508 KRTAP20-2Q3LI61 65 aa5.38□□□□□ -1.55
SMARCAL1-209ENST00000444508 KRTAP9-6A8MVA2 160 aa5.35□□□□□ -1.55
SMARCAL1-209ENST00000444508 SYNE1Q8NF91 8797 aaKnown RBP5.32□□□□□ -1.56
SMARCAL1-209ENST00000444508 MT1AP04731 61 aa5.3□□□□□ -1.56
SMARCAL1-209ENST00000444508 KRTAP6-1Q3LI64 71 aa5.25□□□□□ -1.57
SMARCAL1-209ENST00000444508 PRO0628Q9UI54 55 aa5.22□□□□□ -1.57
SMARCAL1-209ENST00000444508 KRTAP5-3Q6L8H2 238 aa5.2□□□□□ -1.58
SMARCAL1-209ENST00000444508 KRTAP5-10Q6L8G5 202 aa5.18□□□□□ -1.58
SMARCAL1-209ENST00000444508 PRAC1Q96KF2 57 aa5.18□□□□□ -1.58
SMARCAL1-209ENST00000444508 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
SMARCAL1-209ENST00000444508 KRTAP5-2Q701N4 177 aa5.04□□□□□ -1.6
SMARCAL1-209ENST00000444508 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
SMARCAL1-209ENST00000444508 KRTAP5-7Q6L8G8 165 aa4.95□□□□□ -1.62
SMARCAL1-209ENST00000444508 KTN1-AS1Q86SY8 53 aa4.95□□□□□ -1.62
SMARCAL1-209ENST00000444508 MT3P25713 68 aa4.86□□□□□ -1.63
SMARCAL1-209ENST00000444508 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
SMARCAL1-209ENST00000444508 SVIPQ8NHG7 77 aa4.76□□□□□ -1.65
SMARCAL1-209ENST00000444508 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
SMARCAL1-209ENST00000444508 KRTAP5-8O75690 187 aa4.67□□□□□ -1.66
SMARCAL1-209ENST00000444508 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
SMARCAL1-209ENST00000444508 KRTAP5-1Q6L8H4 278 aa4.47□□□□□ -1.69
SMARCAL1-209ENST00000444508 MUC5BQ9HC84 5762 aaPredicted RBP4.46□□□□□ -1.7
SMARCAL1-209ENST00000444508 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.7
SMARCAL1-209ENST00000444508 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
SMARCAL1-209ENST00000444508 LUZP6Q538Z0 58 aa4.39□□□□□ -1.71
SMARCAL1-209ENST00000444508 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
SMARCAL1-209ENST00000444508 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
SMARCAL1-209ENST00000444508 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
SMARCAL1-209ENST00000444508 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
SMARCAL1-209ENST00000444508 LCE1CQ5T751 118 aa4.07□□□□□ -1.76
SMARCAL1-209ENST00000444508 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
SMARCAL1-209ENST00000444508 H3BS24 57 aa3.95□□□□□ -1.78
SMARCAL1-209ENST00000444508 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
SMARCAL1-209ENST00000444508 NDUFAF8A1L188 74 aa3.69□□□□□ -1.82
SMARCAL1-209ENST00000444508 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
SMARCAL1-209ENST00000444508 KRTAP4-12Q9BQ66 201 aa3.65□□□□□ -1.83
SMARCAL1-209ENST00000444508 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
SMARCAL1-209ENST00000444508 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
SMARCAL1-209ENST00000444508 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
SMARCAL1-209ENST00000444508 A0A0A0MQY5 61 aa3.13□□□□□ -1.91
SMARCAL1-209ENST00000444508 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
SMARCAL1-209ENST00000444508 PRM1P04553 51 aa3.11□□□□□ -1.91
SMARCAL1-209ENST00000444508 INE1O15225 51 aa3.02□□□□□ -1.93
SMARCAL1-209ENST00000444508 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
SMARCAL1-209ENST00000444508 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
SMARCAL1-209ENST00000444508 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 37.1 ms