RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 A6NED7 52 aa5.88□□□□□ -1.47
CTDSP1-204ENST00000443891 PRO0628Q9UI54 55 aa5.86□□□□□ -1.47
CTDSP1-204ENST00000443891 LCE4AQ5TA78 99 aa5.85□□□□□ -1.47
CTDSP1-204ENST00000443891 LCE1DQ5T752 114 aa5.83□□□□□ -1.48
CTDSP1-204ENST00000443891 UQCR11O14957 56 aa5.82□□□□□ -1.48
CTDSP1-204ENST00000443891 MT1MQ8N339 61 aa5.81□□□□□ -1.48
CTDSP1-204ENST00000443891 TNP1P09430 55 aa5.8□□□□□ -1.48
CTDSP1-204ENST00000443891 MT1LQ93083 61 aa5.79□□□□□ -1.48
CTDSP1-204ENST00000443891 CDC42SE1Q9NRR8 79 aa5.79□□□□□ -1.48
CTDSP1-204ENST00000443891 K7ERS5 55 aa5.71□□□□□ -1.5
CTDSP1-204ENST00000443891 MT4P47944 62 aa5.7□□□□□ -1.5
CTDSP1-204ENST00000443891 MIR22HGQ0VDD5 57 aa5.69□□□□□ -1.5
CTDSP1-204ENST00000443891 KRTAP5-4Q6L8H1 288 aa5.69□□□□□ -1.5
CTDSP1-204ENST00000443891 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
CTDSP1-204ENST00000443891 HMCN1Q96RW7 5635 aa5.68□□□□□ -1.5
CTDSP1-204ENST00000443891 LCE3AQ5TA76 89 aa5.68□□□□□ -1.5
CTDSP1-204ENST00000443891 SVIPQ8NHG7 77 aa5.67□□□□□ -1.5
CTDSP1-204ENST00000443891 PMAIP1Q13794 54 aa5.58□□□□□ -1.52
CTDSP1-204ENST00000443891 KRTAP4-3Q9BYR4 195 aa5.58□□□□□ -1.52
CTDSP1-204ENST00000443891 KRTAP5-10Q6L8G5 202 aa5.53□□□□□ -1.52
CTDSP1-204ENST00000443891 KRTAP4-6Q9BYQ5 205 aa5.53□□□□□ -1.52
CTDSP1-204ENST00000443891 KRTAP12-3P60328 96 aa5.51□□□□□ -1.53
CTDSP1-204ENST00000443891 AHNAK2Q8IVF2 5795 aa5.5□□□□□ -1.53
CTDSP1-204ENST00000443891 KRTAP25-1Q3LHN0 102 aa5.49□□□□□ -1.53
CTDSP1-204ENST00000443891 KTN1-AS1Q86SY8 53 aa5.43□□□□□ -1.54
CTDSP1-204ENST00000443891 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
CTDSP1-204ENST00000443891 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
CTDSP1-204ENST00000443891 KRTAP19-4Q3LI73 84 aa5.37□□□□□ -1.55
CTDSP1-204ENST00000443891 KRTAP5-7Q6L8G8 165 aa5.37□□□□□ -1.55
CTDSP1-204ENST00000443891 KRTAP5-3Q6L8H2 238 aa5.36□□□□□ -1.55
CTDSP1-204ENST00000443891 KRTAP5-5Q701N2 237 aaPredicted RBP5.36□□□□□ -1.55
CTDSP1-204ENST00000443891 KRTAP20-2Q3LI61 65 aa5.35□□□□□ -1.55
CTDSP1-204ENST00000443891 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
CTDSP1-204ENST00000443891 KRTAP23-1A1A580 65 aa5.25□□□□□ -1.57
CTDSP1-204ENST00000443891 ROMO1P60602 79 aa5.22□□□□□ -1.57
CTDSP1-204ENST00000443891 SYNE1Q8NF91 8797 aaKnown RBP5.13□□□□□ -1.59
CTDSP1-204ENST00000443891 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
CTDSP1-204ENST00000443891 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
CTDSP1-204ENST00000443891 PRAC1Q96KF2 57 aa5.09□□□□□ -1.59
CTDSP1-204ENST00000443891 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
CTDSP1-204ENST00000443891 MT1AP04731 61 aa4.95□□□□□ -1.62
CTDSP1-204ENST00000443891 KRTAP5-2Q701N4 177 aa4.95□□□□□ -1.62
CTDSP1-204ENST00000443891 KRTAP4-11Q9BYQ6 195 aa4.95□□□□□ -1.62
CTDSP1-204ENST00000443891 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
CTDSP1-204ENST00000443891 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
CTDSP1-204ENST00000443891 KRTAP5-8O75690 187 aa4.77□□□□□ -1.65
CTDSP1-204ENST00000443891 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
CTDSP1-204ENST00000443891 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
CTDSP1-204ENST00000443891 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
CTDSP1-204ENST00000443891 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
CTDSP1-204ENST00000443891 MUC5BQ9HC84 5762 aaPredicted RBP4.58□□□□□ -1.68
CTDSP1-204ENST00000443891 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
CTDSP1-204ENST00000443891 AHNAKQ09666 5890 aaKnown RBP4.56□□□□□ -1.68
CTDSP1-204ENST00000443891 MT3P25713 68 aa4.56□□□□□ -1.68
CTDSP1-204ENST00000443891 KRTAP5-1Q6L8H4 278 aa4.45□□□□□ -1.7
CTDSP1-204ENST00000443891 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
CTDSP1-204ENST00000443891 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
CTDSP1-204ENST00000443891 NDUFAF8A1L188 74 aa4.19□□□□□ -1.74
CTDSP1-204ENST00000443891 KRTAP4-2Q9BYR5 136 aa3.97□□□□□ -1.77
CTDSP1-204ENST00000443891 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
CTDSP1-204ENST00000443891 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
CTDSP1-204ENST00000443891 H3BS24 57 aa3.94□□□□□ -1.78
CTDSP1-204ENST00000443891 KRTAP4-12Q9BQ66 201 aa3.91□□□□□ -1.78
CTDSP1-204ENST00000443891 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
CTDSP1-204ENST00000443891 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
CTDSP1-204ENST00000443891 INE1O15225 51 aa3.59□□□□□ -1.83
CTDSP1-204ENST00000443891 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
CTDSP1-204ENST00000443891 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
CTDSP1-204ENST00000443891 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
CTDSP1-204ENST00000443891 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
CTDSP1-204ENST00000443891 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
CTDSP1-204ENST00000443891 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
CTDSP1-204ENST00000443891 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
CTDSP1-204ENST00000443891 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
CTDSP1-204ENST00000443891 PRM1P04553 51 aa2.69□□□□□ -1.98
CTDSP1-204ENST00000443891 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
CTDSP1-204ENST00000443891 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms