RNA–Protein interactions for RNA: ENST00000443187.1

PRKD3-203, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-203ENST00000443187 A0A1B0GU69 56 aa4.21□□□□□ -1.74
PRKD3-203ENST00000443187 A8MU10 97 aa4.21□□□□□ -1.74
PRKD3-203ENST00000443187 MT1EP04732 61 aa4.18□□□□□ -1.74
PRKD3-203ENST00000443187 SMIM26A0A096LP01 95 aa4.14□□□□□ -1.75
PRKD3-203ENST00000443187 KRTAP15-1Q3LI76 137 aa4.14□□□□□ -1.75
PRKD3-203ENST00000443187 ATP5EP56381 51 aaPredicted RBP4.13□□□□□ -1.75
PRKD3-203ENST00000443187 KRTAP19-5Q3LI72 72 aa4.12□□□□□ -1.75
PRKD3-203ENST00000443187 KRTAP19-3Q7Z4W3 81 aa4.11□□□□□ -1.75
PRKD3-203ENST00000443187 C10orf95Q9H7T3 257 aa4.1□□□□□ -1.75
PRKD3-203ENST00000443187 LINC01558Q9Y6Z2 57 aa4.1□□□□□ -1.75
PRKD3-203ENST00000443187 DSTQ03001 7570 aaKnown RBP4.06□□□□□ -1.76
PRKD3-203ENST00000443187 TMEM258P61165 79 aa4.06□□□□□ -1.76
PRKD3-203ENST00000443187 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
PRKD3-203ENST00000443187 PRR15LQ9BU68 103 aa4.04□□□□□ -1.76
PRKD3-203ENST00000443187 MT1GP13640 62 aa4□□□□□ -1.77
PRKD3-203ENST00000443187 MT1LQ93083 61 aa4□□□□□ -1.77
PRKD3-203ENST00000443187 TNP1P09430 55 aa3.99□□□□□ -1.77
PRKD3-203ENST00000443187 MT1MQ8N339 61 aa3.97□□□□□ -1.77
PRKD3-203ENST00000443187 UQCR11O14957 56 aa3.95□□□□□ -1.78
PRKD3-203ENST00000443187 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
PRKD3-203ENST00000443187 PP632Q6XCG6 107 aa3.91□□□□□ -1.78
PRKD3-203ENST00000443187 MIR22HGQ0VDD5 57 aa3.88□□□□□ -1.79
PRKD3-203ENST00000443187 PSPHP1O15172 72 aa3.86□□□□□ -1.79
PRKD3-203ENST00000443187 KRTAP12-3P60328 96 aa3.85□□□□□ -1.79
PRKD3-203ENST00000443187 Q1T7F1 81 aa3.83□□□□□ -1.8
PRKD3-203ENST00000443187 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
PRKD3-203ENST00000443187 PRO0628Q9UI54 55 aa3.8□□□□□ -1.8
PRKD3-203ENST00000443187 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
PRKD3-203ENST00000443187 KRTAP25-1Q3LHN0 102 aa3.78□□□□□ -1.8
PRKD3-203ENST00000443187 GPR98Q8WXG9 6306 aa3.77□□□□□ -1.81
PRKD3-203ENST00000443187 MT4P47944 62 aa3.77□□□□□ -1.81
PRKD3-203ENST00000443187 KRTAP5-4Q6L8H1 288 aa3.77□□□□□ -1.81
PRKD3-203ENST00000443187 K7ERS5 55 aa3.72□□□□□ -1.81
PRKD3-203ENST00000443187 RPS28P62857 69 aaKnown RBP3.72□□□□□ -1.81
PRKD3-203ENST00000443187 A6NED7 52 aa3.68□□□□□ -1.82
PRKD3-203ENST00000443187 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
PRKD3-203ENST00000443187 AHNAK2Q8IVF2 5795 aa3.63□□□□□ -1.83
PRKD3-203ENST00000443187 PMAIP1Q13794 54 aa3.58□□□□□ -1.84
PRKD3-203ENST00000443187 CDC42SE1Q9NRR8 79 aa3.58□□□□□ -1.84
PRKD3-203ENST00000443187 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
PRKD3-203ENST00000443187 ROMO1P60602 79 aa3.55□□□□□ -1.84
PRKD3-203ENST00000443187 KRTAP20-2Q3LI61 65 aa3.55□□□□□ -1.84
PRKD3-203ENST00000443187 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
PRKD3-203ENST00000443187 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
PRKD3-203ENST00000443187 SPRR5A0A1B0GTR4 108 aa3.5□□□□□ -1.85
PRKD3-203ENST00000443187 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
PRKD3-203ENST00000443187 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
PRKD3-203ENST00000443187 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
PRKD3-203ENST00000443187 MT3P25713 68 aa3.43□□□□□ -1.86
PRKD3-203ENST00000443187 KRTAP6-1Q3LI64 71 aa3.4□□□□□ -1.87
PRKD3-203ENST00000443187 MT1AP04731 61 aa3.38□□□□□ -1.87
PRKD3-203ENST00000443187 KRTAP5-7Q6L8G8 165 aa3.37□□□□□ -1.87
PRKD3-203ENST00000443187 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
PRKD3-203ENST00000443187 KRTAP5-2Q701N4 177 aa3.32□□□□□ -1.88
PRKD3-203ENST00000443187 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
PRKD3-203ENST00000443187 BRK1Q8WUW1 75 aa3.27□□□□□ -1.89
PRKD3-203ENST00000443187 KTN1-AS1Q86SY8 53 aa3.25□□□□□ -1.89
PRKD3-203ENST00000443187 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
PRKD3-203ENST00000443187 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
PRKD3-203ENST00000443187 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
PRKD3-203ENST00000443187 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
PRKD3-203ENST00000443187 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
PRKD3-203ENST00000443187 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
PRKD3-203ENST00000443187 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
PRKD3-203ENST00000443187 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.94
PRKD3-203ENST00000443187 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
PRKD3-203ENST00000443187 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
PRKD3-203ENST00000443187 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
PRKD3-203ENST00000443187 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
PRKD3-203ENST00000443187 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
PRKD3-203ENST00000443187 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
PRKD3-203ENST00000443187 INE1O15225 51 aa2.46□□□□□ -2.02
PRKD3-203ENST00000443187 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
PRKD3-203ENST00000443187 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
PRKD3-203ENST00000443187 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
PRKD3-203ENST00000443187 PRM1P04553 51 aa1.84□□□□□ -2.11
PRKD3-203ENST00000443187 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
PRKD3-203ENST00000443187 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 64.5 ms