RNA–Protein interactions for RNA: ENST00000441738.1

TIMP1-203, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 5

Gene TIMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-203ENST00000441738 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
TIMP1-203ENST00000441738 KRTAP4-9Q9BYQ8 210 aa3.25□□□□□ -1.89
TIMP1-203ENST00000441738 A0A0D9SG42 100 aa3.23□□□□□ -1.89
TIMP1-203ENST00000441738 KRTAP8-1Q8IUC2 63 aa3.23□□□□□ -1.89
TIMP1-203ENST00000441738 KRTAP5-10Q6L8G5 202 aa3.17□□□□□ -1.9
TIMP1-203ENST00000441738 SPINT4Q6UDR6 99 aa3.17□□□□□ -1.9
TIMP1-203ENST00000441738 ROMO1P60602 79 aa3.16□□□□□ -1.9
TIMP1-203ENST00000441738 CAMK2N1Q7Z7J9 78 aa3.16□□□□□ -1.9
TIMP1-203ENST00000441738 KRTAP19-7Q3SYF9 63 aa3.15□□□□□ -1.91
TIMP1-203ENST00000441738 HMCN1Q96RW7 5635 aa3.14□□□□□ -1.91
TIMP1-203ENST00000441738 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
TIMP1-203ENST00000441738 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
TIMP1-203ENST00000441738 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
TIMP1-203ENST00000441738 PRAC1Q96KF2 57 aa3.12□□□□□ -1.91
TIMP1-203ENST00000441738 C10orf95Q9H7T3 257 aa3.11□□□□□ -1.91
TIMP1-203ENST00000441738 LCE1DQ5T752 114 aa3.1□□□□□ -1.91
TIMP1-203ENST00000441738 MT1EP04732 61 aa3.08□□□□□ -1.92
TIMP1-203ENST00000441738 KRTAP25-1Q3LHN0 102 aa3.07□□□□□ -1.92
TIMP1-203ENST00000441738 KRTAP19-5Q3LI72 72 aa3.04□□□□□ -1.92
TIMP1-203ENST00000441738 LCE5AQ5TCM9 118 aa3.03□□□□□ -1.92
TIMP1-203ENST00000441738 LCE3AQ5TA76 89 aa3.02□□□□□ -1.93
TIMP1-203ENST00000441738 MT4P47944 62 aa3□□□□□ -1.93
TIMP1-203ENST00000441738 KRTAP19-3Q7Z4W3 81 aa3□□□□□ -1.93
TIMP1-203ENST00000441738 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
TIMP1-203ENST00000441738 MT1LQ93083 61 aa2.96□□□□□ -1.94
TIMP1-203ENST00000441738 TNP1P09430 55 aa2.95□□□□□ -1.94
TIMP1-203ENST00000441738 LCE4AQ5TA78 99 aa2.95□□□□□ -1.94
TIMP1-203ENST00000441738 MT1MQ8N339 61 aa2.93□□□□□ -1.94
TIMP1-203ENST00000441738 PP632Q6XCG6 107 aa2.92□□□□□ -1.94
TIMP1-203ENST00000441738 MT1GP13640 62 aa2.91□□□□□ -1.94
TIMP1-203ENST00000441738 KRTAP19-4Q3LI73 84 aa2.89□□□□□ -1.95
TIMP1-203ENST00000441738 KRTAP4-3Q9BYR4 195 aa2.89□□□□□ -1.95
TIMP1-203ENST00000441738 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
TIMP1-203ENST00000441738 KRTAP4-7Q9BYR0 210 aa2.86□□□□□ -1.95
TIMP1-203ENST00000441738 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.95
TIMP1-203ENST00000441738 KRTAP15-1Q3LI76 137 aa2.81□□□□□ -1.96
TIMP1-203ENST00000441738 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
TIMP1-203ENST00000441738 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
TIMP1-203ENST00000441738 KRTAP5-5Q701N2 237 aaPredicted RBP2.72□□□□□ -1.97
TIMP1-203ENST00000441738 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
TIMP1-203ENST00000441738 LOC100996750A0A140TA64 210 aa2.7□□□□□ -1.98
TIMP1-203ENST00000441738 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
TIMP1-203ENST00000441738 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
TIMP1-203ENST00000441738 LCE3CQ5T5A8 94 aa2.66□□□□□ -1.98
TIMP1-203ENST00000441738 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
TIMP1-203ENST00000441738 KRTAP9-6A8MVA2 160 aa2.62□□□□□ -1.99
TIMP1-203ENST00000441738 SYNE1Q8NF91 8797 aaKnown RBP2.6□□□□□ -1.99
TIMP1-203ENST00000441738 KRTAP9-4Q9BYQ2 154 aa2.59□□□□□ -1.99
TIMP1-203ENST00000441738 LUZP6Q538Z0 58 aa2.58□□□□□ -2
TIMP1-203ENST00000441738 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
TIMP1-203ENST00000441738 KRTAP5-8O75690 187 aa2.55□□□□□ -2
TIMP1-203ENST00000441738 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2
TIMP1-203ENST00000441738 KRTAP6-1Q3LI64 71 aa2.51□□□□□ -2.01
TIMP1-203ENST00000441738 MT1AP04731 61 aa2.5□□□□□ -2.01
TIMP1-203ENST00000441738 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
TIMP1-203ENST00000441738 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
TIMP1-203ENST00000441738 KRTAP6-2Q3LI66 62 aa2.36□□□□□ -2.03
TIMP1-203ENST00000441738 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
TIMP1-203ENST00000441738 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.03
TIMP1-203ENST00000441738 MT3P25713 68 aa2.23□□□□□ -2.05
TIMP1-203ENST00000441738 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
TIMP1-203ENST00000441738 LCE1FQ5T754 118 aa2.16□□□□□ -2.06
TIMP1-203ENST00000441738 INE1O15225 51 aa2.14□□□□□ -2.07
TIMP1-203ENST00000441738 LCE1EQ5T753 118 aa2.05□□□□□ -2.08
TIMP1-203ENST00000441738 KRTAP4-2Q9BYR5 136 aa2.01□□□□□ -2.09
TIMP1-203ENST00000441738 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
TIMP1-203ENST00000441738 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
TIMP1-203ENST00000441738 LCE3DQ9BYE3 92 aa1.9□□□□□ -2.11
TIMP1-203ENST00000441738 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
TIMP1-203ENST00000441738 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
TIMP1-203ENST00000441738 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
TIMP1-203ENST00000441738 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
TIMP1-203ENST00000441738 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
TIMP1-203ENST00000441738 PRM1P04553 51 aa1.64□□□□□ -2.15
TIMP1-203ENST00000441738 KRTAP4-4Q9BYR3 166 aa1.5□□□□□ -2.17
TIMP1-203ENST00000441738 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
TIMP1-203ENST00000441738 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
TIMP1-203ENST00000441738 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 12.6 ms