RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 SPTSSBQ8NFR3 76 aa2.17□□□□□ -2.06
PTPN4-206ENST00000441089 H0YAA0 97 aa2.16□□□□□ -2.06
PTPN4-206ENST00000441089 P0C880 135 aa2.16□□□□□ -2.06
PTPN4-206ENST00000441089 DSTQ03001 7570 aaKnown RBP2.15□□□□□ -2.06
PTPN4-206ENST00000441089 ADM2Q7Z4H4 148 aa2.15□□□□□ -2.07
PTPN4-206ENST00000441089 LINC01558Q9Y6Z2 57 aa2.15□□□□□ -2.07
PTPN4-206ENST00000441089 SMIM26A0A096LP01 95 aa2.14□□□□□ -2.07
PTPN4-206ENST00000441089 Q1T7F1 81 aa2.13□□□□□ -2.07
PTPN4-206ENST00000441089 A0A1B0GU69 56 aa2.11□□□□□ -2.07
PTPN4-206ENST00000441089 KRTAP13-4Q3LI77 160 aa2.11□□□□□ -2.07
PTPN4-206ENST00000441089 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
PTPN4-206ENST00000441089 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
PTPN4-206ENST00000441089 PSPHP1O15172 72 aa2.1□□□□□ -2.07
PTPN4-206ENST00000441089 Q5VV11 94 aa2.1□□□□□ -2.07
PTPN4-206ENST00000441089 PRR15LQ9BU68 103 aa2.1□□□□□ -2.07
PTPN4-206ENST00000441089 V9GYY9 64 aa2.09□□□□□ -2.07
PTPN4-206ENST00000441089 MT1BP07438 61 aa2.08□□□□□ -2.08
PTPN4-206ENST00000441089 SEC61GP60059 68 aa2.08□□□□□ -2.08
PTPN4-206ENST00000441089 A0A1B0GU33 70 aa2.07□□□□□ -2.08
PTPN4-206ENST00000441089 M0QZ58 72 aa2.07□□□□□ -2.08
PTPN4-206ENST00000441089 SPATA8Q6RVD6 105 aa2.07□□□□□ -2.08
PTPN4-206ENST00000441089 SPRR2GQ9BYE4 73 aa2.07□□□□□ -2.08
PTPN4-206ENST00000441089 KRTAP5-10Q6L8G5 202 aa2.06□□□□□ -2.08
PTPN4-206ENST00000441089 KRTAP8-1Q8IUC2 63 aa2.06□□□□□ -2.08
PTPN4-206ENST00000441089 CRIPTQ9P021 101 aa2.06□□□□□ -2.08
PTPN4-206ENST00000441089 KRTAP19-8Q3LI54 63 aa2.05□□□□□ -2.08
PTPN4-206ENST00000441089 R4GN34 69 aa2.05□□□□□ -2.08
PTPN4-206ENST00000441089 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
PTPN4-206ENST00000441089 UQCR11O14957 56 aa2.03□□□□□ -2.08
PTPN4-206ENST00000441089 A0A0D9SG42 100 aa2.02□□□□□ -2.09
PTPN4-206ENST00000441089 SPRR5A0A1B0GTR4 108 aa2.02□□□□□ -2.09
PTPN4-206ENST00000441089 MIR22HGQ0VDD5 57 aa2.02□□□□□ -2.09
PTPN4-206ENST00000441089 LINC01554Q52M75 96 aa2.02□□□□□ -2.09
PTPN4-206ENST00000441089 A6NED7 52 aa2.01□□□□□ -2.09
PTPN4-206ENST00000441089 KRTAP12-1P59990 96 aa2.01□□□□□ -2.09
PTPN4-206ENST00000441089 CDC42SE1Q9NRR8 79 aa1.98□□□□□ -2.09
PTPN4-206ENST00000441089 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
PTPN4-206ENST00000441089 SPINT4Q6UDR6 99 aa1.97□□□□□ -2.09
PTPN4-206ENST00000441089 PRO2289Q9P1D8 64 aa1.96□□□□□ -2.1
PTPN4-206ENST00000441089 MT1XP80297 61 aa1.95□□□□□ -2.1
PTPN4-206ENST00000441089 BRK1Q8WUW1 75 aa1.95□□□□□ -2.1
PTPN4-206ENST00000441089 PLAC4Q8WY50 150 aa1.95□□□□□ -2.1
PTPN4-206ENST00000441089 LCE3DQ9BYE3 92 aa1.94□□□□□ -2.1
PTPN4-206ENST00000441089 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
PTPN4-206ENST00000441089 MT4P47944 62 aa1.92□□□□□ -2.1
PTPN4-206ENST00000441089 CAMK2N1Q7Z7J9 78 aa1.91□□□□□ -2.1
PTPN4-206ENST00000441089 C10orf95Q9H7T3 257 aa1.91□□□□□ -2.1
PTPN4-206ENST00000441089 K7ERS5 55 aa1.89□□□□□ -2.11
PTPN4-206ENST00000441089 PRO0628Q9UI54 55 aa1.87□□□□□ -2.11
PTPN4-206ENST00000441089 PP632Q6XCG6 107 aa1.85□□□□□ -2.11
PTPN4-206ENST00000441089 ROMO1P60602 79 aa1.84□□□□□ -2.11
PTPN4-206ENST00000441089 MUC5ACP98088 5654 aa1.82□□□□□ -2.12
PTPN4-206ENST00000441089 PMAIP1Q13794 54 aa1.82□□□□□ -2.12
PTPN4-206ENST00000441089 TNP1P09430 55 aa1.81□□□□□ -2.12
PTPN4-206ENST00000441089 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
PTPN4-206ENST00000441089 KRTAP25-1Q3LHN0 102 aa1.8□□□□□ -2.12
PTPN4-206ENST00000441089 KRTAP19-3Q7Z4W3 81 aa1.76□□□□□ -2.13
PTPN4-206ENST00000441089 KRTAP19-7Q3SYF9 63 aa1.75□□□□□ -2.13
PTPN4-206ENST00000441089 KRTAP19-5Q3LI72 72 aa1.74□□□□□ -2.13
PTPN4-206ENST00000441089 KTN1-AS1Q86SY8 53 aa1.74□□□□□ -2.13
PTPN4-206ENST00000441089 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
PTPN4-206ENST00000441089 MT1EP04732 61 aa1.71□□□□□ -2.14
PTPN4-206ENST00000441089 KRTAP20-2Q3LI61 65 aa1.71□□□□□ -2.14
PTPN4-206ENST00000441089 KRTAP12-3P60328 96 aa1.7□□□□□ -2.14
PTPN4-206ENST00000441089 MT1GP13640 62 aa1.69□□□□□ -2.14
PTPN4-206ENST00000441089 MT1LQ93083 61 aa1.67□□□□□ -2.14
PTPN4-206ENST00000441089 KRTAP12-4P60329 112 aa1.63□□□□□ -2.15
PTPN4-206ENST00000441089 MT1MQ8N339 61 aa1.63□□□□□ -2.15
PTPN4-206ENST00000441089 SYNE1Q8NF91 8797 aaKnown RBP1.59□□□□□ -2.16
PTPN4-206ENST00000441089 MT1AP04731 61 aa1.41□□□□□ -2.18
PTPN4-206ENST00000441089 KRTAP6-1Q3LI64 71 aa1.41□□□□□ -2.18
PTPN4-206ENST00000441089 LUZP6Q538Z0 58 aa1.38□□□□□ -2.19
PTPN4-206ENST00000441089 KRTAP6-2Q3LI66 62 aa1.33□□□□□ -2.2
PTPN4-206ENST00000441089 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
PTPN4-206ENST00000441089 INE1O15225 51 aa1.08□□□□□ -2.24
PTPN4-206ENST00000441089 PRM1P04553 51 aa0.97□□□□□ -2.25
PTPN4-206ENST00000441089 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
PTPN4-206ENST00000441089 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms