RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 SPRR2AP35326 72 aa5.41□□□□□ -1.54
PLOD3-205ENST00000440925 KRTAP12-3P60328 96 aa5.36□□□□□ -1.55
PLOD3-205ENST00000440925 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
PLOD3-205ENST00000440925 KRTAP19-3Q7Z4W3 81 aa5.33□□□□□ -1.56
PLOD3-205ENST00000440925 MT1LQ93083 61 aa5.33□□□□□ -1.56
PLOD3-205ENST00000440925 PMAIP1Q13794 54 aa5.32□□□□□ -1.56
PLOD3-205ENST00000440925 KRTAP2-3P0C7H8 128 aa5.31□□□□□ -1.56
PLOD3-205ENST00000440925 KRTAP2-4Q9BYR9 128 aa5.31□□□□□ -1.56
PLOD3-205ENST00000440925 MT1GP13640 62 aa5.25□□□□□ -1.57
PLOD3-205ENST00000440925 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
PLOD3-205ENST00000440925 SPRR2DP22532 72 aa5.21□□□□□ -1.58
PLOD3-205ENST00000440925 MT1MQ8N339 61 aa5.2□□□□□ -1.58
PLOD3-205ENST00000440925 KRTAP4-7Q9BYR0 210 aa5.19□□□□□ -1.58
PLOD3-205ENST00000440925 KRTAP15-1Q3LI76 137 aa5.16□□□□□ -1.58
PLOD3-205ENST00000440925 KRTAP4-3Q9BYR4 195 aa5.15□□□□□ -1.59
PLOD3-205ENST00000440925 KRTAP2-2Q9BYT5 123 aa5.13□□□□□ -1.59
PLOD3-205ENST00000440925 KRTAP2-1Q9BYU5 128 aa5.13□□□□□ -1.59
PLOD3-205ENST00000440925 PRAC1Q96KF2 57 aa5.12□□□□□ -1.59
PLOD3-205ENST00000440925 LCE3BQ5TA77 95 aa5.06□□□□□ -1.6
PLOD3-205ENST00000440925 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
PLOD3-205ENST00000440925 LCE3CQ5T5A8 94 aa5.01□□□□□ -1.61
PLOD3-205ENST00000440925 KTN1-AS1Q86SY8 53 aa5□□□□□ -1.61
PLOD3-205ENST00000440925 DSTQ03001 7570 aaKnown RBP4.98□□□□□ -1.61
PLOD3-205ENST00000440925 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
PLOD3-205ENST00000440925 KRTAP9-6A8MVA2 160 aa4.84□□□□□ -1.63
PLOD3-205ENST00000440925 GPR98Q8WXG9 6306 aa4.8□□□□□ -1.64
PLOD3-205ENST00000440925 KRTAP5-5Q701N2 237 aaPredicted RBP4.77□□□□□ -1.65
PLOD3-205ENST00000440925 KRTAP5-4Q6L8H1 288 aa4.74□□□□□ -1.65
PLOD3-205ENST00000440925 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
PLOD3-205ENST00000440925 SPRR5A0A1B0GTR4 108 aa4.63□□□□□ -1.67
PLOD3-205ENST00000440925 LCE4AQ5TA78 99 aa4.63□□□□□ -1.67
PLOD3-205ENST00000440925 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
PLOD3-205ENST00000440925 KRTAP4-6Q9BYQ5 205 aa4.58□□□□□ -1.68
PLOD3-205ENST00000440925 MT4P47944 62 aa4.56□□□□□ -1.68
PLOD3-205ENST00000440925 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
PLOD3-205ENST00000440925 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
PLOD3-205ENST00000440925 MT1AP04731 61 aa4.51□□□□□ -1.69
PLOD3-205ENST00000440925 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
PLOD3-205ENST00000440925 AHNAK2Q8IVF2 5795 aa4.48□□□□□ -1.69
PLOD3-205ENST00000440925 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.71
PLOD3-205ENST00000440925 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
PLOD3-205ENST00000440925 KRTAP5-10Q6L8G5 202 aa4.36□□□□□ -1.71
PLOD3-205ENST00000440925 KRTAP9-4Q9BYQ2 154 aa4.36□□□□□ -1.71
PLOD3-205ENST00000440925 KRTAP5-3Q6L8H2 238 aa4.32□□□□□ -1.72
PLOD3-205ENST00000440925 KRTAP5-2Q701N4 177 aa4.23□□□□□ -1.73
PLOD3-205ENST00000440925 KRTAP5-7Q6L8G8 165 aa4.22□□□□□ -1.73
PLOD3-205ENST00000440925 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.74
PLOD3-205ENST00000440925 MT3P25713 68 aa4.08□□□□□ -1.76
PLOD3-205ENST00000440925 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
PLOD3-205ENST00000440925 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
PLOD3-205ENST00000440925 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
PLOD3-205ENST00000440925 H3BS24 57 aa3.84□□□□□ -1.79
PLOD3-205ENST00000440925 KRTAP5-8O75690 187 aa3.81□□□□□ -1.8
PLOD3-205ENST00000440925 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
PLOD3-205ENST00000440925 KRTAP5-1Q6L8H4 278 aa3.73□□□□□ -1.81
PLOD3-205ENST00000440925 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
PLOD3-205ENST00000440925 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
PLOD3-205ENST00000440925 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
PLOD3-205ENST00000440925 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
PLOD3-205ENST00000440925 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
PLOD3-205ENST00000440925 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
PLOD3-205ENST00000440925 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
PLOD3-205ENST00000440925 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
PLOD3-205ENST00000440925 KRTAP4-2Q9BYR5 136 aa3.49□□□□□ -1.85
PLOD3-205ENST00000440925 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
PLOD3-205ENST00000440925 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
PLOD3-205ENST00000440925 INE1O15225 51 aa3.31□□□□□ -1.88
PLOD3-205ENST00000440925 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
PLOD3-205ENST00000440925 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
PLOD3-205ENST00000440925 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
PLOD3-205ENST00000440925 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
PLOD3-205ENST00000440925 PRM1P04553 51 aa2.9□□□□□ -1.95
PLOD3-205ENST00000440925 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
PLOD3-205ENST00000440925 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
PLOD3-205ENST00000440925 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
PLOD3-205ENST00000440925 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
PLOD3-205ENST00000440925 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
PLOD3-205ENST00000440925 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 128.3 ms