RNA–Protein interactions for RNA: ENST00000440702.5

FAM20B-202, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

TSL 3

Gene FAM20B, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-202ENST00000440702 K7ERU9 68 aa5.94□□□□□ -1.46
FAM20B-202ENST00000440702 C10orf95Q9H7T3 257 aa5.94□□□□□ -1.46
FAM20B-202ENST00000440702 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
FAM20B-202ENST00000440702 A8MU10 97 aa5.83□□□□□ -1.48
FAM20B-202ENST00000440702 SMIM26A0A096LP01 95 aa5.81□□□□□ -1.48
FAM20B-202ENST00000440702 TNP1P09430 55 aa5.81□□□□□ -1.48
FAM20B-202ENST00000440702 KRTAP4-11Q9BYQ6 195 aa5.81□□□□□ -1.48
FAM20B-202ENST00000440702 KRTAP5-7Q6L8G8 165 aa5.76□□□□□ -1.49
FAM20B-202ENST00000440702 KRTAP5-3Q6L8H2 238 aa5.76□□□□□ -1.49
FAM20B-202ENST00000440702 A0A1B0GU69 56 aa5.75□□□□□ -1.49
FAM20B-202ENST00000440702 KRTAP20-2Q3LI61 65 aa5.69□□□□□ -1.5
FAM20B-202ENST00000440702 H7BZZ5 65 aa5.67□□□□□ -1.5
FAM20B-202ENST00000440702 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
FAM20B-202ENST00000440702 COX7CP15954 63 aa5.66□□□□□ -1.5
FAM20B-202ENST00000440702 KRTAP5-5Q701N2 237 aaPredicted RBP5.6□□□□□ -1.51
FAM20B-202ENST00000440702 SPRR5A0A1B0GTR4 108 aa5.58□□□□□ -1.52
FAM20B-202ENST00000440702 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
FAM20B-202ENST00000440702 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
FAM20B-202ENST00000440702 PRR15LQ9BU68 103 aa5.46□□□□□ -1.54
FAM20B-202ENST00000440702 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
FAM20B-202ENST00000440702 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
FAM20B-202ENST00000440702 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
FAM20B-202ENST00000440702 ANAPC13Q9BS18 74 aa5.31□□□□□ -1.56
FAM20B-202ENST00000440702 UQCR11O14957 56 aa5.26□□□□□ -1.57
FAM20B-202ENST00000440702 CCDC179H3BU77 68 aa5.24□□□□□ -1.57
FAM20B-202ENST00000440702 ATP5EP56381 51 aaPredicted RBP5.22□□□□□ -1.57
FAM20B-202ENST00000440702 KRTAP15-1Q3LI76 137 aa5.18□□□□□ -1.58
FAM20B-202ENST00000440702 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
FAM20B-202ENST00000440702 KRTAP5-2Q701N4 177 aa5.18□□□□□ -1.58
FAM20B-202ENST00000440702 KRTAP6-1Q3LI64 71 aa5.17□□□□□ -1.58
FAM20B-202ENST00000440702 MT1AP04731 61 aa5.14□□□□□ -1.59
FAM20B-202ENST00000440702 MIR22HGQ0VDD5 57 aa5.14□□□□□ -1.59
FAM20B-202ENST00000440702 K7ERS5 55 aa5.09□□□□□ -1.59
FAM20B-202ENST00000440702 KRTAP5-8O75690 187 aa5.09□□□□□ -1.59
FAM20B-202ENST00000440702 AHNAKQ09666 5890 aaKnown RBP5.08□□□□□ -1.6
FAM20B-202ENST00000440702 MUC5ACP98088 5654 aa5.04□□□□□ -1.6
FAM20B-202ENST00000440702 MUC5BQ9HC84 5762 aaPredicted RBP5.04□□□□□ -1.6
FAM20B-202ENST00000440702 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
FAM20B-202ENST00000440702 KRTAP6-2Q3LI66 62 aa5□□□□□ -1.61
FAM20B-202ENST00000440702 TMEM258P61165 79 aa4.96□□□□□ -1.62
FAM20B-202ENST00000440702 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
FAM20B-202ENST00000440702 H3BS24 57 aa4.91□□□□□ -1.62
FAM20B-202ENST00000440702 PSPHP1O15172 72 aa4.9□□□□□ -1.63
FAM20B-202ENST00000440702 OBSCNQ5VST9 7968 aa4.89□□□□□ -1.63
FAM20B-202ENST00000440702 CDC42SE1Q9NRR8 79 aa4.79□□□□□ -1.64
FAM20B-202ENST00000440702 RPS28P62857 69 aaKnown RBP4.78□□□□□ -1.64
FAM20B-202ENST00000440702 Q1T7F1 81 aa4.75□□□□□ -1.65
FAM20B-202ENST00000440702 V9GYY9 64 aa4.75□□□□□ -1.65
FAM20B-202ENST00000440702 MT3P25713 68 aa4.71□□□□□ -1.66
FAM20B-202ENST00000440702 KRTAP5-1Q6L8H4 278 aa4.71□□□□□ -1.66
FAM20B-202ENST00000440702 A6NED7 52 aa4.69□□□□□ -1.66
FAM20B-202ENST00000440702 PCP4P48539 62 aa4.69□□□□□ -1.66
FAM20B-202ENST00000440702 ROMO1P60602 79 aa4.69□□□□□ -1.66
FAM20B-202ENST00000440702 LCE1EQ5T753 118 aa4.35□□□□□ -1.71
FAM20B-202ENST00000440702 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
FAM20B-202ENST00000440702 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
FAM20B-202ENST00000440702 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
FAM20B-202ENST00000440702 BRK1Q8WUW1 75 aa3.96□□□□□ -1.78
FAM20B-202ENST00000440702 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
FAM20B-202ENST00000440702 PMAIP1Q13794 54 aa3.76□□□□□ -1.81
FAM20B-202ENST00000440702 PRO0628Q9UI54 55 aa3.74□□□□□ -1.81
FAM20B-202ENST00000440702 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
FAM20B-202ENST00000440702 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
FAM20B-202ENST00000440702 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
FAM20B-202ENST00000440702 KTN1-AS1Q86SY8 53 aa3.49□□□□□ -1.85
FAM20B-202ENST00000440702 PRAC1Q96KF2 57 aa3.48□□□□□ -1.85
FAM20B-202ENST00000440702 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
FAM20B-202ENST00000440702 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
FAM20B-202ENST00000440702 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
FAM20B-202ENST00000440702 SVIPQ8NHG7 77 aa3.36□□□□□ -1.87
FAM20B-202ENST00000440702 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
FAM20B-202ENST00000440702 LUZP6Q538Z0 58 aa2.99□□□□□ -1.93
FAM20B-202ENST00000440702 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
FAM20B-202ENST00000440702 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
FAM20B-202ENST00000440702 PRM1P04553 51 aa2.41□□□□□ -2.02
FAM20B-202ENST00000440702 A0A0A0MQY5 61 aa2.38□□□□□ -2.03
FAM20B-202ENST00000440702 INE1O15225 51 aa2.24□□□□□ -2.05
FAM20B-202ENST00000440702 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 65.4 ms