RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 LCE1DQ5T752 114 aa1.79□□□□□ -2.12
SCN3A-204ENST00000440431 KRTAP10-5P60370 271 aa1.79□□□□□ -2.12
SCN3A-204ENST00000440431 MT1XP80297 61 aa1.78□□□□□ -2.12
SCN3A-204ENST00000440431 LCE3BQ5TA77 95 aa1.78□□□□□ -2.12
SCN3A-204ENST00000440431 KMT2DO14686 5537 aa1.78□□□□□ -2.12
SCN3A-204ENST00000440431 KRTAP10-7P60409 375 aaPredicted RBP1.75□□□□□ -2.13
SCN3A-204ENST00000440431 CRCT1Q9UGL9 99 aa1.75□□□□□ -2.13
SCN3A-204ENST00000440431 SPRR2FQ96RM1 72 aa1.74□□□□□ -2.13
SCN3A-204ENST00000440431 FSIP2Q5CZC0 6907 aa1.73□□□□□ -2.13
SCN3A-204ENST00000440431 LCE5AQ5TCM9 118 aa1.72□□□□□ -2.13
SCN3A-204ENST00000440431 FCGBPQ9Y6R7 5405 aaPredicted RBP1.7□□□□□ -2.14
SCN3A-204ENST00000440431 KRTAP19-5Q3LI72 72 aa1.69□□□□□ -2.14
SCN3A-204ENST00000440431 KRTAP19-6Q3LI70 58 aa1.67□□□□□ -2.14
SCN3A-204ENST00000440431 LCE3CQ5T5A8 94 aa1.67□□□□□ -2.14
SCN3A-204ENST00000440431 MT1GP13640 62 aa1.66□□□□□ -2.14
SCN3A-204ENST00000440431 SPRR2EP22531 72 aa1.66□□□□□ -2.14
SCN3A-204ENST00000440431 SPRR2BP35325 72 aa1.66□□□□□ -2.14
SCN3A-204ENST00000440431 SPRR2AP35326 72 aa1.66□□□□□ -2.14
SCN3A-204ENST00000440431 KRTAP5-3Q6L8H2 238 aa1.64□□□□□ -2.15
SCN3A-204ENST00000440431 MACF1Q9UPN3 7388 aaKnown RBP1.63□□□□□ -2.15
SCN3A-204ENST00000440431 SPRR2DP22532 72 aa1.62□□□□□ -2.15
SCN3A-204ENST00000440431 KRTAP19-7Q3SYF9 63 aa1.61□□□□□ -2.15
SCN3A-204ENST00000440431 KRTAP12-4P60329 112 aa1.6□□□□□ -2.15
SCN3A-204ENST00000440431 MUC12Q9UKN1 5478 aa1.58□□□□□ -2.16
SCN3A-204ENST00000440431 KRTAP19-3Q7Z4W3 81 aa1.57□□□□□ -2.16
SCN3A-204ENST00000440431 SYNE2Q8WXH0 6885 aaKnown RBP1.57□□□□□ -2.16
SCN3A-204ENST00000440431 MT1LQ93083 61 aa1.55□□□□□ -2.16
SCN3A-204ENST00000440431 MT1EP04732 61 aa1.54□□□□□ -2.16
SCN3A-204ENST00000440431 MDN1Q9NU22 5596 aa1.53□□□□□ -2.16
SCN3A-204ENST00000440431 KRTAP9-6A8MVA2 160 aa1.51□□□□□ -2.17
SCN3A-204ENST00000440431 LCE1AQ5T7P2 110 aa1.51□□□□□ -2.17
SCN3A-204ENST00000440431 KRTAP5-9P26371 169 aa1.5□□□□□ -2.17
SCN3A-204ENST00000440431 MT3P25713 68 aa1.5□□□□□ -2.17
SCN3A-204ENST00000440431 KRTAP6-3Q3LI67 103 aa1.5□□□□□ -2.17
SCN3A-204ENST00000440431 MT1MQ8N339 61 aa1.48□□□□□ -2.17
SCN3A-204ENST00000440431 KRTAP4-3Q9BYR4 195 aa1.47□□□□□ -2.17
SCN3A-204ENST00000440431 GPR98Q8WXG9 6306 aa1.46□□□□□ -2.18
SCN3A-204ENST00000440431 DSTQ03001 7570 aaKnown RBP1.45□□□□□ -2.18
SCN3A-204ENST00000440431 LCE3DQ9BYE3 92 aa1.44□□□□□ -2.18
SCN3A-204ENST00000440431 KRTAP20-1Q3LI63 56 aa1.43□□□□□ -2.18
SCN3A-204ENST00000440431 KRTAP2-3P0C7H8 128 aa1.43□□□□□ -2.18
SCN3A-204ENST00000440431 KRTAP2-4Q9BYR9 128 aa1.43□□□□□ -2.18
SCN3A-204ENST00000440431 LCE3EQ5T5B0 92 aa1.42□□□□□ -2.18
SCN3A-204ENST00000440431 KRTAP2-1Q9BYU5 128 aa1.42□□□□□ -2.18
SCN3A-204ENST00000440431 MT1AP04731 61 aa1.4□□□□□ -2.18
SCN3A-204ENST00000440431 NEBP20929 6669 aa1.4□□□□□ -2.18
SCN3A-204ENST00000440431 KRTAP2-2Q9BYT5 123 aa1.38□□□□□ -2.19
SCN3A-204ENST00000440431 KRTAP5-5Q701N2 237 aaPredicted RBP1.38□□□□□ -2.19
SCN3A-204ENST00000440431 LCE1FQ5T754 118 aa1.38□□□□□ -2.19
SCN3A-204ENST00000440431 SYNE1Q8NF91 8797 aaKnown RBP1.38□□□□□ -2.19
SCN3A-204ENST00000440431 OBSCNQ5VST9 7968 aa1.38□□□□□ -2.19
SCN3A-204ENST00000440431 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.37□□□□□ -2.19
SCN3A-204ENST00000440431 KRTAP5-11Q6L8G4 156 aa1.37□□□□□ -2.19
SCN3A-204ENST00000440431 MT4P47944 62 aa1.36□□□□□ -2.19
SCN3A-204ENST00000440431 MUC5BQ9HC84 5762 aaPredicted RBP1.33□□□□□ -2.2
SCN3A-204ENST00000440431 KRTAP6-1Q3LI64 71 aa1.29□□□□□ -2.2
SCN3A-204ENST00000440431 KRTAP5-4Q6L8H1 288 aa1.28□□□□□ -2.2
SCN3A-204ENST00000440431 HMCN1Q96RW7 5635 aa1.26□□□□□ -2.21
SCN3A-204ENST00000440431 LCE1BQ5T7P3 118 aa1.25□□□□□ -2.21
SCN3A-204ENST00000440431 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
SCN3A-204ENST00000440431 KRTAP6-2Q3LI66 62 aa1.21□□□□□ -2.22
SCN3A-204ENST00000440431 PRM1P04553 51 aa1.19□□□□□ -2.22
SCN3A-204ENST00000440431 LCE1EQ5T753 118 aa1.18□□□□□ -2.22
SCN3A-204ENST00000440431 KRTAP5-2Q701N4 177 aa1.18□□□□□ -2.22
SCN3A-204ENST00000440431 KRTAP5-1Q6L8H4 278 aa1.16□□□□□ -2.22
SCN3A-204ENST00000440431 MUC19Q7Z5P9 8384 aa1.15□□□□□ -2.22
SCN3A-204ENST00000440431 KRTAP20-2Q3LI61 65 aa1.15□□□□□ -2.23
SCN3A-204ENST00000440431 KRTAP5-7Q6L8G8 165 aa1.14□□□□□ -2.23
SCN3A-204ENST00000440431 KRTAP4-4Q9BYR3 166 aa1.14□□□□□ -2.23
SCN3A-204ENST00000440431 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
SCN3A-204ENST00000440431 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
SCN3A-204ENST00000440431 LCE1CQ5T751 118 aa1.06□□□□□ -2.24
SCN3A-204ENST00000440431 MUC5ACP98088 5654 aa1.01□□□□□ -2.25
SCN3A-204ENST00000440431 KRTAP5-8O75690 187 aa0.99□□□□□ -2.25
SCN3A-204ENST00000440431 KRTAP21-2Q3LI59 83 aa0.88□□□□□ -2.27
SCN3A-204ENST00000440431 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
SCN3A-204ENST00000440431 PHGR1C9JFL3 82 aa0.72□□□□□ -2.29
SCN3A-204ENST00000440431 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 59.2 ms