RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 PRO0628Q9UI54 55 aa4.34□□□□□ -1.71
PDGFB-203ENST00000440375 BRK1Q8WUW1 75 aa4.33□□□□□ -1.72
PDGFB-203ENST00000440375 MIR22HGQ0VDD5 57 aa4.3□□□□□ -1.72
PDGFB-203ENST00000440375 A6NED7 52 aa4.29□□□□□ -1.72
PDGFB-203ENST00000440375 MT1GP13640 62 aa4.29□□□□□ -1.72
PDGFB-203ENST00000440375 MT1MQ8N339 61 aa4.26□□□□□ -1.73
PDGFB-203ENST00000440375 MT1LQ93083 61 aa4.26□□□□□ -1.73
PDGFB-203ENST00000440375 CDC42SE1Q9NRR8 79 aa4.26□□□□□ -1.73
PDGFB-203ENST00000440375 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
PDGFB-203ENST00000440375 LCE1DQ5T752 114 aa4.23□□□□□ -1.73
PDGFB-203ENST00000440375 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
PDGFB-203ENST00000440375 PP632Q6XCG6 107 aa4.23□□□□□ -1.73
PDGFB-203ENST00000440375 HMCN1Q96RW7 5635 aa4.21□□□□□ -1.74
PDGFB-203ENST00000440375 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
PDGFB-203ENST00000440375 TNP1P09430 55 aa4.17□□□□□ -1.74
PDGFB-203ENST00000440375 MT4P47944 62 aa4.17□□□□□ -1.74
PDGFB-203ENST00000440375 K7ERS5 55 aa4.16□□□□□ -1.74
PDGFB-203ENST00000440375 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
PDGFB-203ENST00000440375 AHNAK2Q8IVF2 5795 aa4.11□□□□□ -1.75
PDGFB-203ENST00000440375 PMAIP1Q13794 54 aa4.11□□□□□ -1.75
PDGFB-203ENST00000440375 KRTAP5-4Q6L8H1 288 aa4.1□□□□□ -1.75
PDGFB-203ENST00000440375 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
PDGFB-203ENST00000440375 KRTAP4-6Q9BYQ5 205 aa4.05□□□□□ -1.76
PDGFB-203ENST00000440375 KRTAP12-3P60328 96 aa4.04□□□□□ -1.76
PDGFB-203ENST00000440375 KRTAP25-1Q3LHN0 102 aa4.02□□□□□ -1.77
PDGFB-203ENST00000440375 KTN1-AS1Q86SY8 53 aa4.01□□□□□ -1.77
PDGFB-203ENST00000440375 KRTAP5-10Q6L8G5 202 aa3.97□□□□□ -1.77
PDGFB-203ENST00000440375 ROMO1P60602 79 aa3.94□□□□□ -1.78
PDGFB-203ENST00000440375 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
PDGFB-203ENST00000440375 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
PDGFB-203ENST00000440375 LOC100996750A0A140TA64 210 aa3.86□□□□□ -1.79
PDGFB-203ENST00000440375 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
PDGFB-203ENST00000440375 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
PDGFB-203ENST00000440375 SPRR5A0A1B0GTR4 108 aa3.82□□□□□ -1.8
PDGFB-203ENST00000440375 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
PDGFB-203ENST00000440375 KRTAP5-7Q6L8G8 165 aa3.81□□□□□ -1.8
PDGFB-203ENST00000440375 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
PDGFB-203ENST00000440375 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
PDGFB-203ENST00000440375 KRTAP15-1Q3LI76 137 aa3.74□□□□□ -1.81
PDGFB-203ENST00000440375 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
PDGFB-203ENST00000440375 KRTAP19-4Q3LI73 84 aa3.7□□□□□ -1.82
PDGFB-203ENST00000440375 H3BS24 57 aa3.63□□□□□ -1.83
PDGFB-203ENST00000440375 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
PDGFB-203ENST00000440375 MT1AP04731 61 aa3.6□□□□□ -1.83
PDGFB-203ENST00000440375 KRTAP5-2Q701N4 177 aa3.59□□□□□ -1.83
PDGFB-203ENST00000440375 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
PDGFB-203ENST00000440375 KRTAP4-11Q9BYQ6 195 aa3.55□□□□□ -1.84
PDGFB-203ENST00000440375 AHNAKQ09666 5890 aaKnown RBP3.48□□□□□ -1.85
PDGFB-203ENST00000440375 KRTAP9-4Q9BYQ2 154 aa3.48□□□□□ -1.85
PDGFB-203ENST00000440375 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
PDGFB-203ENST00000440375 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
PDGFB-203ENST00000440375 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.87
PDGFB-203ENST00000440375 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
PDGFB-203ENST00000440375 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
PDGFB-203ENST00000440375 MT3P25713 68 aa3.27□□□□□ -1.89
PDGFB-203ENST00000440375 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
PDGFB-203ENST00000440375 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
PDGFB-203ENST00000440375 A0A0A0MQY5 61 aa3.22□□□□□ -1.89
PDGFB-203ENST00000440375 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
PDGFB-203ENST00000440375 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
PDGFB-203ENST00000440375 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
PDGFB-203ENST00000440375 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
PDGFB-203ENST00000440375 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
PDGFB-203ENST00000440375 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
PDGFB-203ENST00000440375 KRTAP4-12Q9BQ66 201 aa2.68□□□□□ -1.98
PDGFB-203ENST00000440375 INE1O15225 51 aa2.66□□□□□ -1.98
PDGFB-203ENST00000440375 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
PDGFB-203ENST00000440375 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
PDGFB-203ENST00000440375 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
PDGFB-203ENST00000440375 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
PDGFB-203ENST00000440375 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
PDGFB-203ENST00000440375 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
PDGFB-203ENST00000440375 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
PDGFB-203ENST00000440375 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
PDGFB-203ENST00000440375 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
PDGFB-203ENST00000440375 PRM1P04553 51 aa2.04□□□□□ -2.08
PDGFB-203ENST00000440375 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
PDGFB-203ENST00000440375 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms