RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 SPRR2AP35326 72 aa6.16□□□□□ -1.42
UBE2F-214ENST00000440223 KRTAP20-1Q3LI63 56 aa6.09□□□□□ -1.43
UBE2F-214ENST00000440223 SVIPQ8NHG7 77 aa6.09□□□□□ -1.43
UBE2F-214ENST00000440223 LCE1AQ5T7P2 110 aa6.07□□□□□ -1.44
UBE2F-214ENST00000440223 KRTAP4-12Q9BQ66 201 aa6.07□□□□□ -1.44
UBE2F-214ENST00000440223 KRTAP2-3P0C7H8 128 aa5.97□□□□□ -1.45
UBE2F-214ENST00000440223 KRTAP12-3P60328 96 aa5.97□□□□□ -1.45
UBE2F-214ENST00000440223 KRTAP2-4Q9BYR9 128 aa5.97□□□□□ -1.45
UBE2F-214ENST00000440223 SPRR2DP22532 72 aa5.96□□□□□ -1.46
UBE2F-214ENST00000440223 KRTAP19-5Q3LI72 72 aa5.96□□□□□ -1.46
UBE2F-214ENST00000440223 LCE3BQ5TA77 95 aa5.95□□□□□ -1.46
UBE2F-214ENST00000440223 KRTAP19-7Q3SYF9 63 aa5.88□□□□□ -1.47
UBE2F-214ENST00000440223 KRTAP9-9Q9BYP9 154 aa5.87□□□□□ -1.47
UBE2F-214ENST00000440223 KRTAP9-4Q9BYQ2 154 aa5.87□□□□□ -1.47
UBE2F-214ENST00000440223 MT1EP04732 61 aa5.84□□□□□ -1.47
UBE2F-214ENST00000440223 KRTAP15-1Q3LI76 137 aa5.82□□□□□ -1.48
UBE2F-214ENST00000440223 KRTAP2-2Q9BYT5 123 aa5.8□□□□□ -1.48
UBE2F-214ENST00000440223 KRTAP2-1Q9BYU5 128 aa5.8□□□□□ -1.48
UBE2F-214ENST00000440223 KRTAP19-3Q7Z4W3 81 aa5.77□□□□□ -1.49
UBE2F-214ENST00000440223 LCE5AQ5TCM9 118 aa5.75□□□□□ -1.49
UBE2F-214ENST00000440223 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
UBE2F-214ENST00000440223 MT1LQ93083 61 aa5.69□□□□□ -1.5
UBE2F-214ENST00000440223 MT1GP13640 62 aa5.66□□□□□ -1.5
UBE2F-214ENST00000440223 LCE1DQ5T752 114 aa5.61□□□□□ -1.51
UBE2F-214ENST00000440223 KRTAP4-7Q9BYR0 210 aa5.56□□□□□ -1.52
UBE2F-214ENST00000440223 LCE3CQ5T5A8 94 aa5.55□□□□□ -1.52
UBE2F-214ENST00000440223 MT1MQ8N339 61 aa5.55□□□□□ -1.52
UBE2F-214ENST00000440223 DSTQ03001 7570 aaKnown RBP5.51□□□□□ -1.53
UBE2F-214ENST00000440223 H3BS24 57 aa5.47□□□□□ -1.53
UBE2F-214ENST00000440223 LCE4AQ5TA78 99 aa5.46□□□□□ -1.54
UBE2F-214ENST00000440223 KRTAP4-9Q9BYQ8 210 aa5.44□□□□□ -1.54
UBE2F-214ENST00000440223 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
UBE2F-214ENST00000440223 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
UBE2F-214ENST00000440223 KRTAP4-2Q9BYR5 136 aa5.32□□□□□ -1.56
UBE2F-214ENST00000440223 LUZP6Q538Z0 58 aa5.26□□□□□ -1.57
UBE2F-214ENST00000440223 KRTAP4-11Q9BYQ6 195 aa5.26□□□□□ -1.57
UBE2F-214ENST00000440223 KRTAP5-4Q6L8H1 288 aa5.18□□□□□ -1.58
UBE2F-214ENST00000440223 MT4P47944 62 aa5.17□□□□□ -1.58
UBE2F-214ENST00000440223 KRTAP9-6A8MVA2 160 aa5.14□□□□□ -1.59
UBE2F-214ENST00000440223 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
UBE2F-214ENST00000440223 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
UBE2F-214ENST00000440223 GPR98Q8WXG9 6306 aa4.94□□□□□ -1.62
UBE2F-214ENST00000440223 KRTAP12-4P60329 112 aa4.93□□□□□ -1.62
UBE2F-214ENST00000440223 NDUFAF8A1L188 74 aa4.91□□□□□ -1.62
UBE2F-214ENST00000440223 KRTAP20-2Q3LI61 65 aa4.89□□□□□ -1.63
UBE2F-214ENST00000440223 MT1AP04731 61 aa4.88□□□□□ -1.63
UBE2F-214ENST00000440223 AHNAK2Q8IVF2 5795 aa4.85□□□□□ -1.63
UBE2F-214ENST00000440223 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
UBE2F-214ENST00000440223 KRTAP6-1Q3LI64 71 aa4.77□□□□□ -1.65
UBE2F-214ENST00000440223 KRTAP5-10Q6L8G5 202 aa4.73□□□□□ -1.65
UBE2F-214ENST00000440223 KRTAP5-3Q6L8H2 238 aa4.72□□□□□ -1.65
UBE2F-214ENST00000440223 KRTAP5-2Q701N4 177 aa4.57□□□□□ -1.68
UBE2F-214ENST00000440223 KRTAP5-7Q6L8G8 165 aa4.54□□□□□ -1.68
UBE2F-214ENST00000440223 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
UBE2F-214ENST00000440223 MT3P25713 68 aa4.44□□□□□ -1.7
UBE2F-214ENST00000440223 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
UBE2F-214ENST00000440223 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
UBE2F-214ENST00000440223 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
UBE2F-214ENST00000440223 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
UBE2F-214ENST00000440223 INE1O15225 51 aa4.13□□□□□ -1.75
UBE2F-214ENST00000440223 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
UBE2F-214ENST00000440223 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
UBE2F-214ENST00000440223 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
UBE2F-214ENST00000440223 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
UBE2F-214ENST00000440223 MUC5BQ9HC84 5762 aaPredicted RBP3.94□□□□□ -1.78
UBE2F-214ENST00000440223 AHNAKQ09666 5890 aaKnown RBP3.92□□□□□ -1.78
UBE2F-214ENST00000440223 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
UBE2F-214ENST00000440223 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
UBE2F-214ENST00000440223 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
UBE2F-214ENST00000440223 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
UBE2F-214ENST00000440223 PRM1P04553 51 aa3.42□□□□□ -1.86
UBE2F-214ENST00000440223 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
UBE2F-214ENST00000440223 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
UBE2F-214ENST00000440223 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
UBE2F-214ENST00000440223 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
UBE2F-214ENST00000440223 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
UBE2F-214ENST00000440223 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
UBE2F-214ENST00000440223 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 10.6 ms