RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 LCE3AQ5TA76 89 aa7.42□□□□□ -1.22
VIL1-204ENST00000440053 KRTAP4-9Q9BYQ8 210 aa7.42□□□□□ -1.22
VIL1-204ENST00000440053 LINC01558Q9Y6Z2 57 aa7.4□□□□□ -1.22
VIL1-204ENST00000440053 TNP1P09430 55 aa7.37□□□□□ -1.23
VIL1-204ENST00000440053 MT1LQ93083 61 aa7.37□□□□□ -1.23
VIL1-204ENST00000440053 A6NED7 52 aa7.36□□□□□ -1.23
VIL1-204ENST00000440053 MT1MQ8N339 61 aa7.36□□□□□ -1.23
VIL1-204ENST00000440053 CDC42SE1Q9NRR8 79 aa7.35□□□□□ -1.23
VIL1-204ENST00000440053 PP632Q6XCG6 107 aa7.34□□□□□ -1.23
VIL1-204ENST00000440053 KTN1-AS1Q86SY8 53 aa7.29□□□□□ -1.24
VIL1-204ENST00000440053 KRTAP4-3Q9BYR4 195 aa7.28□□□□□ -1.24
VIL1-204ENST00000440053 UQCR11O14957 56 aa7.2□□□□□ -1.26
VIL1-204ENST00000440053 LCE1DQ5T752 114 aa7.18□□□□□ -1.26
VIL1-204ENST00000440053 MT4P47944 62 aa7.12□□□□□ -1.27
VIL1-204ENST00000440053 KRTAP4-7Q9BYR0 210 aa7.11□□□□□ -1.27
VIL1-204ENST00000440053 GPR98Q8WXG9 6306 aa7.11□□□□□ -1.27
VIL1-204ENST00000440053 LCE4AQ5TA78 99 aa7.11□□□□□ -1.27
VIL1-204ENST00000440053 KRTAP12-3P60328 96 aa7.1□□□□□ -1.27
VIL1-204ENST00000440053 HMCN1Q96RW7 5635 aa7.07□□□□□ -1.28
VIL1-204ENST00000440053 MIR22HGQ0VDD5 57 aa7.04□□□□□ -1.28
VIL1-204ENST00000440053 KRTAP5-4Q6L8H1 288 aa7□□□□□ -1.29
VIL1-204ENST00000440053 KRTAP4-6Q9BYQ5 205 aa6.94□□□□□ -1.3
VIL1-204ENST00000440053 K7ERS5 55 aa6.92□□□□□ -1.3
VIL1-204ENST00000440053 KRTAP25-1Q3LHN0 102 aa6.92□□□□□ -1.3
VIL1-204ENST00000440053 AHNAK2Q8IVF2 5795 aa6.81□□□□□ -1.32
VIL1-204ENST00000440053 LOC100996750A0A140TA64 210 aa6.73□□□□□ -1.33
VIL1-204ENST00000440053 KRTAP5-5Q701N2 237 aaPredicted RBP6.73□□□□□ -1.33
VIL1-204ENST00000440053 PRAC1Q96KF2 57 aa6.7□□□□□ -1.34
VIL1-204ENST00000440053 KRTAP5-10Q6L8G5 202 aa6.66□□□□□ -1.34
VIL1-204ENST00000440053 KRTAP20-2Q3LI61 65 aa6.63□□□□□ -1.35
VIL1-204ENST00000440053 KRTAP23-1A1A580 65 aa6.62□□□□□ -1.35
VIL1-204ENST00000440053 KRTAP15-1Q3LI76 137 aa6.61□□□□□ -1.35
VIL1-204ENST00000440053 KRTAP19-4Q3LI73 84 aa6.56□□□□□ -1.36
VIL1-204ENST00000440053 SPRR5A0A1B0GTR4 108 aa6.54□□□□□ -1.36
VIL1-204ENST00000440053 LCE3CQ5T5A8 94 aa6.54□□□□□ -1.36
VIL1-204ENST00000440053 KRTAP12-4P60329 112 aa6.53□□□□□ -1.36
VIL1-204ENST00000440053 KRTAP5-3Q6L8H2 238 aa6.52□□□□□ -1.37
VIL1-204ENST00000440053 SYNE1Q8NF91 8797 aaKnown RBP6.5□□□□□ -1.37
VIL1-204ENST00000440053 ROMO1P60602 79 aa6.44□□□□□ -1.38
VIL1-204ENST00000440053 KRTAP5-7Q6L8G8 165 aa6.38□□□□□ -1.39
VIL1-204ENST00000440053 KRTAP6-1Q3LI64 71 aa6.28□□□□□ -1.4
VIL1-204ENST00000440053 MT1AP04731 61 aa6.25□□□□□ -1.41
VIL1-204ENST00000440053 KRTAP9-6A8MVA2 160 aa6.24□□□□□ -1.41
VIL1-204ENST00000440053 H3BS24 57 aa6.2□□□□□ -1.42
VIL1-204ENST00000440053 KRTAP5-2Q701N4 177 aa6.13□□□□□ -1.43
VIL1-204ENST00000440053 KRTAP9-4Q9BYQ2 154 aa6.08□□□□□ -1.44
VIL1-204ENST00000440053 KRTAP4-11Q9BYQ6 195 aa6.05□□□□□ -1.44
VIL1-204ENST00000440053 KRTAP6-2Q3LI66 62 aa5.99□□□□□ -1.45
VIL1-204ENST00000440053 KRTAP5-8O75690 187 aa5.86□□□□□ -1.47
VIL1-204ENST00000440053 OBSCNQ5VST9 7968 aa5.82□□□□□ -1.48
VIL1-204ENST00000440053 NDUFAF8A1L188 74 aa5.76□□□□□ -1.49
VIL1-204ENST00000440053 MT3P25713 68 aa5.71□□□□□ -1.49
VIL1-204ENST00000440053 MUC5BQ9HC84 5762 aaPredicted RBP5.62□□□□□ -1.51
VIL1-204ENST00000440053 AHNAKQ09666 5890 aaKnown RBP5.57□□□□□ -1.52
VIL1-204ENST00000440053 LUZP6Q538Z0 58 aa5.57□□□□□ -1.52
VIL1-204ENST00000440053 MUC5ACP98088 5654 aa5.56□□□□□ -1.52
VIL1-204ENST00000440053 KRTAP5-1Q6L8H4 278 aa5.53□□□□□ -1.52
VIL1-204ENST00000440053 KRTAP9-9Q9BYP9 154 aa5.53□□□□□ -1.52
VIL1-204ENST00000440053 A0A0A0MQY5 61 aa5.39□□□□□ -1.55
VIL1-204ENST00000440053 LCE1EQ5T753 118 aa5.22□□□□□ -1.57
VIL1-204ENST00000440053 LCE1BQ5T7P3 118 aa5□□□□□ -1.61
VIL1-204ENST00000440053 KRTAP4-2Q9BYR5 136 aa5□□□□□ -1.61
VIL1-204ENST00000440053 INE1O15225 51 aa4.91□□□□□ -1.62
VIL1-204ENST00000440053 KRTAP4-12Q9BQ66 201 aa4.88□□□□□ -1.63
VIL1-204ENST00000440053 LCE1CQ5T751 118 aa4.87□□□□□ -1.63
VIL1-204ENST00000440053 LCE3DQ9BYE3 92 aa4.7□□□□□ -1.66
VIL1-204ENST00000440053 LCE3EQ5T5B0 92 aa4.41□□□□□ -1.7
VIL1-204ENST00000440053 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
VIL1-204ENST00000440053 KRTAP5-11Q6L8G4 156 aa4.39□□□□□ -1.71
VIL1-204ENST00000440053 LCE1FQ5T754 118 aa4.25□□□□□ -1.73
VIL1-204ENST00000440053 KRTAP21-2Q3LI59 83 aa4.12□□□□□ -1.75
VIL1-204ENST00000440053 PHGR1C9JFL3 82 aa3.88□□□□□ -1.79
VIL1-204ENST00000440053 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
VIL1-204ENST00000440053 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
VIL1-204ENST00000440053 PRM1P04553 51 aa3.33□□□□□ -1.88
VIL1-204ENST00000440053 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.94
VIL1-204ENST00000440053 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 1268 ms