RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 SPRR5A0A1B0GTR4 108 aa5.26□□□□□ -1.57
CPSF7-205ENST00000439958 MDN1Q9NU22 5596 aa5.25□□□□□ -1.57
CPSF7-205ENST00000439958 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
CPSF7-205ENST00000439958 KRTAP9-6A0A140TA67 174 aa5.18□□□□□ -1.58
CPSF7-205ENST00000439958 KRTAP19-3Q7Z4W3 81 aa5.16□□□□□ -1.58
CPSF7-205ENST00000439958 H3BS24 57 aa5.15□□□□□ -1.58
CPSF7-205ENST00000439958 KRTAP9-6A8MVA2 160 aa5.09□□□□□ -1.6
CPSF7-205ENST00000439958 MT1GP13640 62 aa5.09□□□□□ -1.6
CPSF7-205ENST00000439958 MT1MQ8N339 61 aa5.08□□□□□ -1.6
CPSF7-205ENST00000439958 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.06□□□□□ -1.6
CPSF7-205ENST00000439958 SPRR2EP22531 72 aa5.06□□□□□ -1.6
CPSF7-205ENST00000439958 SPRR2BP35325 72 aa5.06□□□□□ -1.6
CPSF7-205ENST00000439958 SPRR2AP35326 72 aa5.06□□□□□ -1.6
CPSF7-205ENST00000439958 LOC100996750A0A140TA64 210 aa5.05□□□□□ -1.6
CPSF7-205ENST00000439958 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
CPSF7-205ENST00000439958 LCE1AQ5T7P2 110 aa4.96□□□□□ -1.62
CPSF7-205ENST00000439958 KRTAP5-9P26371 169 aa4.93□□□□□ -1.62
CPSF7-205ENST00000439958 KRTAP19-4Q3LI73 84 aa4.92□□□□□ -1.62
CPSF7-205ENST00000439958 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
CPSF7-205ENST00000439958 A0A0A0MQY5 61 aa4.86□□□□□ -1.63
CPSF7-205ENST00000439958 KRTAP6-3Q3LI67 103 aa4.85□□□□□ -1.63
CPSF7-205ENST00000439958 SPRR2DP22532 72 aa4.84□□□□□ -1.63
CPSF7-205ENST00000439958 KRTAP9-7A8MTY7 169 aa4.8□□□□□ -1.64
CPSF7-205ENST00000439958 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
CPSF7-205ENST00000439958 NEBP20929 6669 aa4.63□□□□□ -1.67
CPSF7-205ENST00000439958 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
CPSF7-205ENST00000439958 KRTAP2-3P0C7H8 128 aa4.58□□□□□ -1.68
CPSF7-205ENST00000439958 KRTAP2-4Q9BYR9 128 aa4.58□□□□□ -1.68
CPSF7-205ENST00000439958 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
CPSF7-205ENST00000439958 KRTAP6-1Q3LI64 71 aa4.54□□□□□ -1.68
CPSF7-205ENST00000439958 MT1AP04731 61 aa4.44□□□□□ -1.7
CPSF7-205ENST00000439958 KRTAP4-9Q9BYQ8 210 aa4.41□□□□□ -1.7
CPSF7-205ENST00000439958 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
CPSF7-205ENST00000439958 MT4P47944 62 aa4.36□□□□□ -1.71
CPSF7-205ENST00000439958 INE1O15225 51 aa4.3□□□□□ -1.72
CPSF7-205ENST00000439958 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
CPSF7-205ENST00000439958 KRTAP20-1Q3LI63 56 aa4.24□□□□□ -1.73
CPSF7-205ENST00000439958 KRTAP9-4Q9BYQ2 154 aa4.21□□□□□ -1.73
CPSF7-205ENST00000439958 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
CPSF7-205ENST00000439958 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
CPSF7-205ENST00000439958 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
CPSF7-205ENST00000439958 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
CPSF7-205ENST00000439958 LCE3DQ9BYE3 92 aa4.1□□□□□ -1.75
CPSF7-205ENST00000439958 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.75
CPSF7-205ENST00000439958 MT3P25713 68 aa4.08□□□□□ -1.76
CPSF7-205ENST00000439958 LCE1DQ5T752 114 aa4.08□□□□□ -1.76
CPSF7-205ENST00000439958 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
CPSF7-205ENST00000439958 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
CPSF7-205ENST00000439958 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
CPSF7-205ENST00000439958 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
CPSF7-205ENST00000439958 KRTAP5-2Q701N4 177 aa3.71□□□□□ -1.81
CPSF7-205ENST00000439958 PRM1P04553 51 aa3.62□□□□□ -1.83
CPSF7-205ENST00000439958 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
CPSF7-205ENST00000439958 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
CPSF7-205ENST00000439958 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
CPSF7-205ENST00000439958 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
CPSF7-205ENST00000439958 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
CPSF7-205ENST00000439958 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
CPSF7-205ENST00000439958 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
CPSF7-205ENST00000439958 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
CPSF7-205ENST00000439958 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
CPSF7-205ENST00000439958 MUC5BQ9HC84 5762 aaPredicted RBP3.15□□□□□ -1.9
CPSF7-205ENST00000439958 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.9
CPSF7-205ENST00000439958 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
CPSF7-205ENST00000439958 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
CPSF7-205ENST00000439958 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
CPSF7-205ENST00000439958 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
CPSF7-205ENST00000439958 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
CPSF7-205ENST00000439958 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
CPSF7-205ENST00000439958 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
CPSF7-205ENST00000439958 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
CPSF7-205ENST00000439958 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
CPSF7-205ENST00000439958 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
CPSF7-205ENST00000439958 AHNAKQ09666 5890 aaKnown RBP2.59□□□□□ -2
CPSF7-205ENST00000439958 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
CPSF7-205ENST00000439958 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
CPSF7-205ENST00000439958 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 42.8 ms