RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 KRTAP19-8Q3LI54 63 aa3.32□□□□□ -1.88
COPS3-203ENST00000439936 KRTAP19-6Q3LI70 58 aa3.32□□□□□ -1.88
COPS3-203ENST00000439936 MT1BP07438 61 aa3.31□□□□□ -1.88
COPS3-203ENST00000439936 PRO2289Q9P1D8 64 aa3.31□□□□□ -1.88
COPS3-203ENST00000439936 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
COPS3-203ENST00000439936 SPINT4Q6UDR6 99 aa3.3□□□□□ -1.88
COPS3-203ENST00000439936 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
COPS3-203ENST00000439936 FCGBPQ9Y6R7 5405 aaPredicted RBP3.28□□□□□ -1.88
COPS3-203ENST00000439936 R4GN34 69 aa3.24□□□□□ -1.89
COPS3-203ENST00000439936 M0QZ58 72 aa3.22□□□□□ -1.89
COPS3-203ENST00000439936 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
COPS3-203ENST00000439936 PLAC4Q8WY50 150 aa3.17□□□□□ -1.9
COPS3-203ENST00000439936 KRTAP13-4Q3LI77 160 aa3.13□□□□□ -1.91
COPS3-203ENST00000439936 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
COPS3-203ENST00000439936 MT1XP80297 61 aa3.12□□□□□ -1.91
COPS3-203ENST00000439936 INE1O15225 51 aa3.12□□□□□ -1.91
COPS3-203ENST00000439936 MACF1Q9UPN3 7388 aaKnown RBP3.08□□□□□ -1.92
COPS3-203ENST00000439936 KRTAP6-3Q3LI67 103 aa3.08□□□□□ -1.92
COPS3-203ENST00000439936 A0A0D9SG42 100 aa3.03□□□□□ -1.92
COPS3-203ENST00000439936 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
COPS3-203ENST00000439936 KRTAP12-2P59991 146 aa3.01□□□□□ -1.93
COPS3-203ENST00000439936 LCE3AQ5TA76 89 aa3□□□□□ -1.93
COPS3-203ENST00000439936 KRTAP12-1P59990 96 aa2.99□□□□□ -1.93
COPS3-203ENST00000439936 SYNE2Q8WXH0 6885 aaKnown RBP2.98□□□□□ -1.93
COPS3-203ENST00000439936 KMT2DO14686 5537 aa2.95□□□□□ -1.94
COPS3-203ENST00000439936 KRTAP8-1Q8IUC2 63 aa2.94□□□□□ -1.94
COPS3-203ENST00000439936 SPRR2FQ96RM1 72 aa2.91□□□□□ -1.94
COPS3-203ENST00000439936 MUC12Q9UKN1 5478 aa2.89□□□□□ -1.95
COPS3-203ENST00000439936 C10orf95Q9H7T3 257 aa2.87□□□□□ -1.95
COPS3-203ENST00000439936 SPRR2EP22531 72 aa2.84□□□□□ -1.96
COPS3-203ENST00000439936 SPRR2BP35325 72 aa2.84□□□□□ -1.96
COPS3-203ENST00000439936 SPRR2AP35326 72 aa2.84□□□□□ -1.96
COPS3-203ENST00000439936 PP632Q6XCG6 107 aa2.84□□□□□ -1.96
COPS3-203ENST00000439936 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
COPS3-203ENST00000439936 TNP1P09430 55 aa2.8□□□□□ -1.96
COPS3-203ENST00000439936 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
COPS3-203ENST00000439936 KRTAP19-7Q3SYF9 63 aa2.79□□□□□ -1.96
COPS3-203ENST00000439936 NEBP20929 6669 aa2.78□□□□□ -1.96
COPS3-203ENST00000439936 KRTAP20-1Q3LI63 56 aa2.77□□□□□ -1.97
COPS3-203ENST00000439936 KRTAP2-3P0C7H8 128 aa2.75□□□□□ -1.97
COPS3-203ENST00000439936 KRTAP19-5Q3LI72 72 aa2.75□□□□□ -1.97
COPS3-203ENST00000439936 KRTAP2-4Q9BYR9 128 aa2.75□□□□□ -1.97
COPS3-203ENST00000439936 MT1EP04732 61 aa2.74□□□□□ -1.97
COPS3-203ENST00000439936 SPRR2DP22532 72 aa2.74□□□□□ -1.97
COPS3-203ENST00000439936 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
COPS3-203ENST00000439936 KRTAP19-3Q7Z4W3 81 aa2.7□□□□□ -1.98
COPS3-203ENST00000439936 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
COPS3-203ENST00000439936 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
COPS3-203ENST00000439936 KRTAP2-1Q9BYU5 128 aa2.68□□□□□ -1.98
COPS3-203ENST00000439936 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
COPS3-203ENST00000439936 MT1GP13640 62 aa2.67□□□□□ -1.98
COPS3-203ENST00000439936 MT1LQ93083 61 aa2.66□□□□□ -1.98
COPS3-203ENST00000439936 KRTAP12-3P60328 96 aa2.64□□□□□ -1.99
COPS3-203ENST00000439936 MT1MQ8N339 61 aa2.61□□□□□ -1.99
COPS3-203ENST00000439936 DSTQ03001 7570 aaKnown RBP2.57□□□□□ -2
COPS3-203ENST00000439936 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
COPS3-203ENST00000439936 MT4P47944 62 aa2.39□□□□□ -2.03
COPS3-203ENST00000439936 HMCN1Q96RW7 5635 aa2.3□□□□□ -2.04
COPS3-203ENST00000439936 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
COPS3-203ENST00000439936 KRTAP20-2Q3LI61 65 aa2.27□□□□□ -2.05
COPS3-203ENST00000439936 MT1AP04731 61 aa2.26□□□□□ -2.05
COPS3-203ENST00000439936 KRTAP6-1Q3LI64 71 aa2.25□□□□□ -2.05
COPS3-203ENST00000439936 SYNE1Q8NF91 8797 aaKnown RBP2.25□□□□□ -2.05
COPS3-203ENST00000439936 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
COPS3-203ENST00000439936 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
COPS3-203ENST00000439936 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
COPS3-203ENST00000439936 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
COPS3-203ENST00000439936 KRTAP6-2Q3LI66 62 aa2.12□□□□□ -2.07
COPS3-203ENST00000439936 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
COPS3-203ENST00000439936 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
COPS3-203ENST00000439936 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
COPS3-203ENST00000439936 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
COPS3-203ENST00000439936 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
COPS3-203ENST00000439936 PRM1P04553 51 aa1.63□□□□□ -2.15
COPS3-203ENST00000439936 PHGR1C9JFL3 82 aa1.34□□□□□ -2.2
COPS3-203ENST00000439936 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
COPS3-203ENST00000439936 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 8.5 ms