RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
SMPD4-208ENST00000439029 MP68P56378 58 aa3.05□□□□□ -1.92
SMPD4-208ENST00000439029 ANAPC13Q9BS18 74 aa3.05□□□□□ -1.92
SMPD4-208ENST00000439029 RPS28P62857 69 aaKnown RBP3.03□□□□□ -1.92
SMPD4-208ENST00000439029 PRO0461Q9UI25 63 aa3.02□□□□□ -1.93
SMPD4-208ENST00000439029 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
SMPD4-208ENST00000439029 TRAV7A0A075B6U4 112 aa3.01□□□□□ -1.93
SMPD4-208ENST00000439029 F8W1H4 67 aa3.01□□□□□ -1.93
SMPD4-208ENST00000439029 SPINT4Q6UDR6 99 aa3.01□□□□□ -1.93
SMPD4-208ENST00000439029 CCDC179H3BU77 68 aa3□□□□□ -1.93
SMPD4-208ENST00000439029 SPTSSBQ8NFR3 76 aa2.99□□□□□ -1.93
SMPD4-208ENST00000439029 PRO0628Q9UI54 55 aa2.98□□□□□ -1.93
SMPD4-208ENST00000439029 V9GYY9 64 aa2.98□□□□□ -1.93
SMPD4-208ENST00000439029 OCR1Q9BZK8 76 aa2.96□□□□□ -1.94
SMPD4-208ENST00000439029 ACYP2P14621 99 aa2.94□□□□□ -1.94
SMPD4-208ENST00000439029 KRTAP12-3P60328 96 aa2.94□□□□□ -1.94
SMPD4-208ENST00000439029 CHKB-CPT1BH3BT56 60 aa2.93□□□□□ -1.94
SMPD4-208ENST00000439029 ETDBQ3ZM63 59 aa2.93□□□□□ -1.94
SMPD4-208ENST00000439029 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
SMPD4-208ENST00000439029 SPATA8Q6RVD6 105 aa2.9□□□□□ -1.95
SMPD4-208ENST00000439029 KRTAP12-1P59990 96 aa2.89□□□□□ -1.95
SMPD4-208ENST00000439029 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
SMPD4-208ENST00000439029 ATP5EP2Q5VTU8 51 aa2.89□□□□□ -1.95
SMPD4-208ENST00000439029 TNP1P09430 55 aa2.88□□□□□ -1.95
SMPD4-208ENST00000439029 TMEM258P61165 79 aa2.88□□□□□ -1.95
SMPD4-208ENST00000439029 H3BPC8 53 aa2.87□□□□□ -1.95
SMPD4-208ENST00000439029 MT1AP04731 61 aa2.86□□□□□ -1.95
SMPD4-208ENST00000439029 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
SMPD4-208ENST00000439029 COX7CP15954 63 aa2.85□□□□□ -1.95
SMPD4-208ENST00000439029 FAM240AA0A1B0GVK7 77 aa2.83□□□□□ -1.96
SMPD4-208ENST00000439029 PMAIP1Q13794 54 aa2.82□□□□□ -1.96
SMPD4-208ENST00000439029 SERP1Q9Y6X1 66 aa2.8□□□□□ -1.96
SMPD4-208ENST00000439029 SMIM26A0A096LP01 95 aa2.79□□□□□ -1.96
SMPD4-208ENST00000439029 SERP2Q8N6R1 65 aa2.77□□□□□ -1.97
SMPD4-208ENST00000439029 LINC00643Q86TS7 51 aa2.76□□□□□ -1.97
SMPD4-208ENST00000439029 BRK1Q8WUW1 75 aa2.75□□□□□ -1.97
SMPD4-208ENST00000439029 ATP5EP56381 51 aaPredicted RBP2.72□□□□□ -1.97
SMPD4-208ENST00000439029 A0A1B0GU33 70 aa2.71□□□□□ -1.98
SMPD4-208ENST00000439029 A8MU10 97 aa2.7□□□□□ -1.98
SMPD4-208ENST00000439029 H7BZZ5 65 aa2.69□□□□□ -1.98
SMPD4-208ENST00000439029 KTN1-AS1Q86SY8 53 aa2.69□□□□□ -1.98
SMPD4-208ENST00000439029 KRTAP25-1Q3LHN0 102 aa2.66□□□□□ -1.98
SMPD4-208ENST00000439029 LCE3CQ5T5A8 94 aa2.65□□□□□ -1.99
SMPD4-208ENST00000439029 Q1T7F1 81 aa2.64□□□□□ -1.99
SMPD4-208ENST00000439029 MT3P25713 68 aa2.63□□□□□ -1.99
SMPD4-208ENST00000439029 SNURFQ9Y675 71 aa2.58□□□□□ -2
SMPD4-208ENST00000439029 KRTAP9-6A8MVA2 160 aa2.57□□□□□ -2
SMPD4-208ENST00000439029 COA5Q86WW8 74 aa2.56□□□□□ -2
SMPD4-208ENST00000439029 PRAC1Q96KF2 57 aa2.55□□□□□ -2
SMPD4-208ENST00000439029 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
SMPD4-208ENST00000439029 SPANXA2-OT1Q8N9U9 137 aa2.51□□□□□ -2.01
SMPD4-208ENST00000439029 CDC42SE1Q9NRR8 79 aa2.5□□□□□ -2.01
SMPD4-208ENST00000439029 PSPHP1O15172 72 aa2.49□□□□□ -2.01
SMPD4-208ENST00000439029 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
SMPD4-208ENST00000439029 NDUFAF8A1L188 74 aa2.43□□□□□ -2.02
SMPD4-208ENST00000439029 A0A1B0GU69 56 aa2.42□□□□□ -2.02
SMPD4-208ENST00000439029 A6NED7 52 aa2.42□□□□□ -2.02
SMPD4-208ENST00000439029 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
SMPD4-208ENST00000439029 PRR15LQ9BU68 103 aa2.41□□□□□ -2.02
SMPD4-208ENST00000439029 LINC01558Q9Y6Z2 57 aa2.39□□□□□ -2.03
SMPD4-208ENST00000439029 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
SMPD4-208ENST00000439029 ROMO1P60602 79 aa2.35□□□□□ -2.03
SMPD4-208ENST00000439029 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
SMPD4-208ENST00000439029 MIR22HGQ0VDD5 57 aa2.28□□□□□ -2.04
SMPD4-208ENST00000439029 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
SMPD4-208ENST00000439029 UQCR11O14957 56 aa2.21□□□□□ -2.06
SMPD4-208ENST00000439029 LUZP6Q538Z0 58 aa2.2□□□□□ -2.06
SMPD4-208ENST00000439029 K7ERS5 55 aa2.19□□□□□ -2.06
SMPD4-208ENST00000439029 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
SMPD4-208ENST00000439029 LCE3EQ5T5B0 92 aa2.03□□□□□ -2.08
SMPD4-208ENST00000439029 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
SMPD4-208ENST00000439029 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
SMPD4-208ENST00000439029 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
SMPD4-208ENST00000439029 INE1O15225 51 aa1.84□□□□□ -2.11
SMPD4-208ENST00000439029 LCE3DQ9BYE3 92 aa1.79□□□□□ -2.12
SMPD4-208ENST00000439029 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
SMPD4-208ENST00000439029 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
SMPD4-208ENST00000439029 PRM1P04553 51 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms