RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 KRTAP2-2Q9BYT5 123 aa6.01□□□□□ -1.45
CTSD-205ENST00000438213 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
CTSD-205ENST00000438213 LCE3AQ5TA76 89 aa6□□□□□ -1.45
CTSD-205ENST00000438213 KRTAP19-3Q7Z4W3 81 aa5.98□□□□□ -1.45
CTSD-205ENST00000438213 LCE3BQ5TA77 95 aa5.96□□□□□ -1.46
CTSD-205ENST00000438213 LCE5AQ5TCM9 118 aa5.96□□□□□ -1.46
CTSD-205ENST00000438213 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
CTSD-205ENST00000438213 MT1GP13640 62 aa5.91□□□□□ -1.46
CTSD-205ENST00000438213 PP632Q6XCG6 107 aa5.87□□□□□ -1.47
CTSD-205ENST00000438213 MT1LQ93083 61 aa5.84□□□□□ -1.47
CTSD-205ENST00000438213 KRTAP12-3P60328 96 aa5.81□□□□□ -1.48
CTSD-205ENST00000438213 ROMO1P60602 79 aa5.78□□□□□ -1.48
CTSD-205ENST00000438213 MT1MQ8N339 61 aa5.76□□□□□ -1.49
CTSD-205ENST00000438213 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
CTSD-205ENST00000438213 PMAIP1Q13794 54 aa5.73□□□□□ -1.49
CTSD-205ENST00000438213 DSTQ03001 7570 aaKnown RBP5.71□□□□□ -1.5
CTSD-205ENST00000438213 KTN1-AS1Q86SY8 53 aa5.62□□□□□ -1.51
CTSD-205ENST00000438213 KRTAP4-3Q9BYR4 195 aa5.59□□□□□ -1.51
CTSD-205ENST00000438213 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
CTSD-205ENST00000438213 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
CTSD-205ENST00000438213 KRTAP15-1Q3LI76 137 aa5.51□□□□□ -1.53
CTSD-205ENST00000438213 LCE4AQ5TA78 99 aa5.47□□□□□ -1.53
CTSD-205ENST00000438213 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.54
CTSD-205ENST00000438213 LCE3CQ5T5A8 94 aa5.37□□□□□ -1.55
CTSD-205ENST00000438213 LCE1DQ5T752 114 aa5.36□□□□□ -1.55
CTSD-205ENST00000438213 KRTAP5-4Q6L8H1 288 aa5.36□□□□□ -1.55
CTSD-205ENST00000438213 MT4P47944 62 aa5.34□□□□□ -1.55
CTSD-205ENST00000438213 PRAC1Q96KF2 57 aa5.28□□□□□ -1.56
CTSD-205ENST00000438213 LOC100996750A0A140TA64 210 aa5.23□□□□□ -1.57
CTSD-205ENST00000438213 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
CTSD-205ENST00000438213 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
CTSD-205ENST00000438213 HMCN1Q96RW7 5635 aa5.18□□□□□ -1.58
CTSD-205ENST00000438213 KRTAP12-4P60329 112 aa5.13□□□□□ -1.59
CTSD-205ENST00000438213 SPRR5A0A1B0GTR4 108 aa5.08□□□□□ -1.6
CTSD-205ENST00000438213 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
CTSD-205ENST00000438213 GPR98Q8WXG9 6306 aa5.02□□□□□ -1.61
CTSD-205ENST00000438213 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
CTSD-205ENST00000438213 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
CTSD-205ENST00000438213 MT1AP04731 61 aa4.98□□□□□ -1.61
CTSD-205ENST00000438213 KRTAP6-1Q3LI64 71 aa4.91□□□□□ -1.62
CTSD-205ENST00000438213 AHNAK2Q8IVF2 5795 aa4.88□□□□□ -1.63
CTSD-205ENST00000438213 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
CTSD-205ENST00000438213 KRTAP5-10Q6L8G5 202 aa4.86□□□□□ -1.63
CTSD-205ENST00000438213 KRTAP9-4Q9BYQ2 154 aa4.81□□□□□ -1.64
CTSD-205ENST00000438213 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
CTSD-205ENST00000438213 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
CTSD-205ENST00000438213 KRTAP5-7Q6L8G8 165 aa4.66□□□□□ -1.66
CTSD-205ENST00000438213 H3BS24 57 aa4.61□□□□□ -1.67
CTSD-205ENST00000438213 MT3P25713 68 aa4.58□□□□□ -1.68
CTSD-205ENST00000438213 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
CTSD-205ENST00000438213 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
CTSD-205ENST00000438213 LUZP6Q538Z0 58 aa4.4□□□□□ -1.71
CTSD-205ENST00000438213 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
CTSD-205ENST00000438213 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.71
CTSD-205ENST00000438213 KRTAP5-1Q6L8H4 278 aa4.2□□□□□ -1.74
CTSD-205ENST00000438213 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
CTSD-205ENST00000438213 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
CTSD-205ENST00000438213 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
CTSD-205ENST00000438213 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
CTSD-205ENST00000438213 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
CTSD-205ENST00000438213 AHNAKQ09666 5890 aaKnown RBP3.95□□□□□ -1.78
CTSD-205ENST00000438213 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
CTSD-205ENST00000438213 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
CTSD-205ENST00000438213 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
CTSD-205ENST00000438213 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
CTSD-205ENST00000438213 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
CTSD-205ENST00000438213 INE1O15225 51 aa3.73□□□□□ -1.81
CTSD-205ENST00000438213 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
CTSD-205ENST00000438213 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
CTSD-205ENST00000438213 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
CTSD-205ENST00000438213 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
CTSD-205ENST00000438213 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
CTSD-205ENST00000438213 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
CTSD-205ENST00000438213 PRM1P04553 51 aa2.94□□□□□ -1.94
CTSD-205ENST00000438213 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
CTSD-205ENST00000438213 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
CTSD-205ENST00000438213 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
CTSD-205ENST00000438213 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 103.2 ms