RNA–Protein interactions for RNA: ENST00000438169.6

KRR1-202, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 1 (best) BASIC

Gene KRR1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-202ENST00000438169 KRTAP2-3P0C7H8 128 aa1.37□□□□□ -2.19
KRR1-202ENST00000438169 KRTAP12-3P60328 96 aa1.37□□□□□ -2.19
KRR1-202ENST00000438169 KRTAP8-1Q8IUC2 63 aa1.37□□□□□ -2.19
KRR1-202ENST00000438169 KRTAP2-4Q9BYR9 128 aa1.37□□□□□ -2.19
KRR1-202ENST00000438169 KRTAP2-1Q9BYU5 128 aa1.37□□□□□ -2.19
KRR1-202ENST00000438169 PKD1P98161 4303 aa1.35□□□□□ -2.19
KRR1-202ENST00000438169 HUWE1Q7Z6Z7 4374 aaKnown RBP1.35□□□□□ -2.19
KRR1-202ENST00000438169 PKHD1L1Q86WI1 4243 aa1.34□□□□□ -2.19
KRR1-202ENST00000438169 MACF1Q9UPN3 7388 aaKnown RBP1.33□□□□□ -2.2
KRR1-202ENST00000438169 DNAH10Q8IVF4 4471 aa1.33□□□□□ -2.2
KRR1-202ENST00000438169 STAB2Q8WWQ8 2551 aa1.32□□□□□ -2.2
KRR1-202ENST00000438169 DNAH9Q9NYC9 4486 aa1.32□□□□□ -2.2
KRR1-202ENST00000438169 HSPG2P98160 4391 aa1.32□□□□□ -2.2
KRR1-202ENST00000438169 HMCN2Q8NDA2 5059 aa1.31□□□□□ -2.2
KRR1-202ENST00000438169 KRTAP20-1Q3LI63 56 aa1.31□□□□□ -2.2
KRR1-202ENST00000438169 ANK3Q12955 4377 aaKnown RBP1.3□□□□□ -2.2
KRR1-202ENST00000438169 KRTAP10-4P60372 401 aaPredicted RBP1.29□□□□□ -2.2
KRR1-202ENST00000438169 DNAH17Q9UFH2 4485 aa1.28□□□□□ -2.2
KRR1-202ENST00000438169 SSPOA2VEC9 5147 aa1.28□□□□□ -2.2
KRR1-202ENST00000438169 FAT3Q8TDW7 4589 aa1.26□□□□□ -2.21
KRR1-202ENST00000438169 FAT2Q9NYQ8 4349 aa1.26□□□□□ -2.21
KRR1-202ENST00000438169 PKHD1P08F94 4074 aa1.24□□□□□ -2.21
KRR1-202ENST00000438169 DNAH5Q8TE73 4624 aa1.24□□□□□ -2.21
KRR1-202ENST00000438169 KMT2DO14686 5537 aa1.22□□□□□ -2.21
KRR1-202ENST00000438169 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
KRR1-202ENST00000438169 APOBP04114 4563 aaKnown RBP1.22□□□□□ -2.21
KRR1-202ENST00000438169 TNXBP22105 4242 aa1.2□□□□□ -2.22
KRR1-202ENST00000438169 SMR3BP02814 79 aaPredicted RBP1.2□□□□□ -2.22
KRR1-202ENST00000438169 PLECQ15149 4684 aaKnown RBP1.19□□□□□ -2.22
KRR1-202ENST00000438169 DYNC1H1Q14204 4646 aaKnown RBP1.18□□□□□ -2.22
KRR1-202ENST00000438169 FAT1Q14517 4588 aa1.16□□□□□ -2.22
KRR1-202ENST00000438169 PRM1P04553 51 aa1.16□□□□□ -2.22
KRR1-202ENST00000438169 MUC12Q9UKN1 5478 aa1.16□□□□□ -2.22
KRR1-202ENST00000438169 AHNAKQ09666 5890 aaKnown RBP1.15□□□□□ -2.23
KRR1-202ENST00000438169 LRP1Q07954 4544 aaKnown RBP1.15□□□□□ -2.23
KRR1-202ENST00000438169 LRP2P98164 4655 aa1.14□□□□□ -2.23
KRR1-202ENST00000438169 LPAP08519 4548 aa1.12□□□□□ -2.23
KRR1-202ENST00000438169 USH2AO75445 5202 aa1.12□□□□□ -2.23
KRR1-202ENST00000438169 MT1AP04731 61 aa1.12□□□□□ -2.23
KRR1-202ENST00000438169 KRTAP19-5Q3LI72 72 aa1.12□□□□□ -2.23
KRR1-202ENST00000438169 LRP1BQ9NZR2 4599 aa1.11□□□□□ -2.23
KRR1-202ENST00000438169 DSTQ03001 7570 aaKnown RBP1.1□□□□□ -2.23
KRR1-202ENST00000438169 SPRR2GQ9BYE4 73 aa1.09□□□□□ -2.23
KRR1-202ENST00000438169 STARD9Q9P2P6 4700 aa1.09□□□□□ -2.24
KRR1-202ENST00000438169 SPRR2BP35325 72 aa1.05□□□□□ -2.24
KRR1-202ENST00000438169 MUC5BQ9HC84 5762 aaPredicted RBP1.04□□□□□ -2.24
KRR1-202ENST00000438169 SPRR2AP35326 72 aa1.04□□□□□ -2.24
KRR1-202ENST00000438169 MUC17Q685J3 4493 aa1.03□□□□□ -2.24
KRR1-202ENST00000438169 SPRR2DP22532 72 aa1.03□□□□□ -2.24
KRR1-202ENST00000438169 MT1EP04732 61 aa1.01□□□□□ -2.25
KRR1-202ENST00000438169 KRTAP5-10Q6L8G5 202 aa1□□□□□ -2.25
KRR1-202ENST00000438169 SPRR2FQ96RM1 72 aa0.99□□□□□ -2.25
KRR1-202ENST00000438169 MT1LQ93083 61 aa0.98□□□□□ -2.25
KRR1-202ENST00000438169 MDN1Q9NU22 5596 aa0.97□□□□□ -2.25
KRR1-202ENST00000438169 KRTAP19-8Q3LI54 63 aa0.96□□□□□ -2.26
KRR1-202ENST00000438169 KRTAP6-2Q3LI66 62 aa0.96□□□□□ -2.26
KRR1-202ENST00000438169 MUC5ACP98088 5654 aa0.96□□□□□ -2.26
KRR1-202ENST00000438169 KRTAP19-3Q7Z4W3 81 aa0.95□□□□□ -2.26
KRR1-202ENST00000438169 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
KRR1-202ENST00000438169 SPRR2EP22531 72 aa0.94□□□□□ -2.26
KRR1-202ENST00000438169 MT1HP80294 61 aa0.92□□□□□ -2.26
KRR1-202ENST00000438169 MT1XP80297 61 aa0.92□□□□□ -2.26
KRR1-202ENST00000438169 SYNE1Q8NF91 8797 aaKnown RBP0.88□□□□□ -2.27
KRR1-202ENST00000438169 KRTAP19-2Q3LHN2 52 aa0.87□□□□□ -2.27
KRR1-202ENST00000438169 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
KRR1-202ENST00000438169 KRTAP19-6Q3LI70 58 aa0.84□□□□□ -2.27
KRR1-202ENST00000438169 KRTAP19-7Q3SYF9 63 aa0.81□□□□□ -2.28
KRR1-202ENST00000438169 MT1BP07438 61 aa0.8□□□□□ -2.28
KRR1-202ENST00000438169 MT1HL1P0DM35 61 aa0.77□□□□□ -2.29
KRR1-202ENST00000438169 MT2AP02795 61 aa0.76□□□□□ -2.29
KRR1-202ENST00000438169 MT1GP13640 62 aa0.76□□□□□ -2.29
KRR1-202ENST00000438169 MT4P47944 62 aa0.76□□□□□ -2.29
KRR1-202ENST00000438169 MT1MQ8N339 61 aa0.75□□□□□ -2.29
KRR1-202ENST00000438169 MT1FP04733 61 aa0.69□□□□□ -2.3
KRR1-202ENST00000438169 KRTAP6-1Q3LI64 71 aa0.67□□□□□ -2.3
KRR1-202ENST00000438169 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
KRR1-202ENST00000438169 KRTAP20-2Q3LI61 65 aa0.54□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 354.4 ms