RNA–Protein interactions for RNA: ENST00000437892.1

LINC00858-202, long intergenic non-protein coding RNA 858, humanhuman

TSL 3

Gene LINC00858, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00858-202ENST00000437892 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
LINC00858-202ENST00000437892 PRO2289Q9P1D8 64 aa3.95□□□□□ -1.78
LINC00858-202ENST00000437892 TNP1P09430 55 aa3.94□□□□□ -1.78
LINC00858-202ENST00000437892 FSIP2Q5CZC0 6907 aa3.91□□□□□ -1.78
LINC00858-202ENST00000437892 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
LINC00858-202ENST00000437892 SSPOA2VEC9 5147 aa3.88□□□□□ -1.79
LINC00858-202ENST00000437892 KRTAP19-6Q3LI70 58 aa3.84□□□□□ -1.79
LINC00858-202ENST00000437892 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
LINC00858-202ENST00000437892 KRTAP10-12P60413 245 aa3.79□□□□□ -1.8
LINC00858-202ENST00000437892 CRCT1Q9UGL9 99 aa3.78□□□□□ -1.8
LINC00858-202ENST00000437892 LCE3AQ5TA76 89 aa3.75□□□□□ -1.81
LINC00858-202ENST00000437892 KRTAP8-1Q8IUC2 63 aa3.73□□□□□ -1.81
LINC00858-202ENST00000437892 FCGBPQ9Y6R7 5405 aaPredicted RBP3.66□□□□□ -1.82
LINC00858-202ENST00000437892 KRTAP12-3P60328 96 aa3.62□□□□□ -1.83
LINC00858-202ENST00000437892 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
LINC00858-202ENST00000437892 KRTAP19-5Q3LI72 72 aa3.57□□□□□ -1.84
LINC00858-202ENST00000437892 KMT2DO14686 5537 aa3.56□□□□□ -1.84
LINC00858-202ENST00000437892 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
LINC00858-202ENST00000437892 KRTAP19-7Q3SYF9 63 aa3.54□□□□□ -1.84
LINC00858-202ENST00000437892 MT1EP04732 61 aa3.49□□□□□ -1.85
LINC00858-202ENST00000437892 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
LINC00858-202ENST00000437892 KRTAP5-1Q6L8H4 278 aa3.45□□□□□ -1.86
LINC00858-202ENST00000437892 MACF1Q9UPN3 7388 aaKnown RBP3.45□□□□□ -1.86
LINC00858-202ENST00000437892 SYNE2Q8WXH0 6885 aaKnown RBP3.43□□□□□ -1.86
LINC00858-202ENST00000437892 MT1LQ93083 61 aa3.42□□□□□ -1.86
LINC00858-202ENST00000437892 KRTAP5-9P26371 169 aa3.39□□□□□ -1.87
LINC00858-202ENST00000437892 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
LINC00858-202ENST00000437892 SPRR2FQ96RM1 72 aa3.35□□□□□ -1.87
LINC00858-202ENST00000437892 KRTAP19-3Q7Z4W3 81 aa3.34□□□□□ -1.87
LINC00858-202ENST00000437892 MUC12Q9UKN1 5478 aa3.33□□□□□ -1.88
LINC00858-202ENST00000437892 NEBP20929 6669 aa3.33□□□□□ -1.88
LINC00858-202ENST00000437892 MT1GP13640 62 aa3.32□□□□□ -1.88
LINC00858-202ENST00000437892 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
LINC00858-202ENST00000437892 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
LINC00858-202ENST00000437892 KRTAP6-3Q3LI67 103 aa3.29□□□□□ -1.88
LINC00858-202ENST00000437892 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
LINC00858-202ENST00000437892 MT1MQ8N339 61 aa3.28□□□□□ -1.88
LINC00858-202ENST00000437892 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
LINC00858-202ENST00000437892 MDN1Q9NU22 5596 aa3.25□□□□□ -1.89
LINC00858-202ENST00000437892 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
LINC00858-202ENST00000437892 SPRR2EP22531 72 aa3.18□□□□□ -1.9
LINC00858-202ENST00000437892 SPRR2BP35325 72 aa3.18□□□□□ -1.9
LINC00858-202ENST00000437892 SPRR2AP35326 72 aa3.18□□□□□ -1.9
LINC00858-202ENST00000437892 KRTAP20-1Q3LI63 56 aa3.18□□□□□ -1.9
LINC00858-202ENST00000437892 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
LINC00858-202ENST00000437892 SPRR2DP22532 72 aa3.07□□□□□ -1.92
LINC00858-202ENST00000437892 KRTAP2-3P0C7H8 128 aa3□□□□□ -1.93
LINC00858-202ENST00000437892 KRTAP2-4Q9BYR9 128 aa3□□□□□ -1.93
LINC00858-202ENST00000437892 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
LINC00858-202ENST00000437892 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
LINC00858-202ENST00000437892 DSTQ03001 7570 aaKnown RBP2.96□□□□□ -1.93
LINC00858-202ENST00000437892 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
LINC00858-202ENST00000437892 MT1AP04731 61 aa2.92□□□□□ -1.94
LINC00858-202ENST00000437892 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
LINC00858-202ENST00000437892 INE1O15225 51 aa2.73□□□□□ -1.97
LINC00858-202ENST00000437892 KRTAP12-4P60329 112 aa2.73□□□□□ -1.97
LINC00858-202ENST00000437892 SYNE1Q8NF91 8797 aaKnown RBP2.73□□□□□ -1.97
LINC00858-202ENST00000437892 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
LINC00858-202ENST00000437892 AHNAK2Q8IVF2 5795 aa2.7□□□□□ -1.98
LINC00858-202ENST00000437892 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
LINC00858-202ENST00000437892 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
LINC00858-202ENST00000437892 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
LINC00858-202ENST00000437892 MT4P47944 62 aa2.61□□□□□ -1.99
LINC00858-202ENST00000437892 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
LINC00858-202ENST00000437892 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
LINC00858-202ENST00000437892 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
LINC00858-202ENST00000437892 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
LINC00858-202ENST00000437892 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
LINC00858-202ENST00000437892 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
LINC00858-202ENST00000437892 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.03
LINC00858-202ENST00000437892 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
LINC00858-202ENST00000437892 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
LINC00858-202ENST00000437892 PRM1P04553 51 aa2.15□□□□□ -2.07
LINC00858-202ENST00000437892 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
LINC00858-202ENST00000437892 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
LINC00858-202ENST00000437892 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
LINC00858-202ENST00000437892 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
LINC00858-202ENST00000437892 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 44.7 ms