RNA–Protein interactions for RNA: ENST00000437733.5

TRAPPC12-208, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 518 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-208ENST00000437733 KRTAP12-1P59990 96 aa2.84□□□□□ -1.95
TRAPPC12-208ENST00000437733 KRTAP10-10P60014 251 aa2.84□□□□□ -1.95
TRAPPC12-208ENST00000437733 KRTAP12-2P59991 146 aa2.83□□□□□ -1.96
TRAPPC12-208ENST00000437733 MT1FP04733 61 aa2.82□□□□□ -1.96
TRAPPC12-208ENST00000437733 SPRR2GQ9BYE4 73 aa2.79□□□□□ -1.96
TRAPPC12-208ENST00000437733 PLAC4Q8WY50 150 aa2.75□□□□□ -1.97
TRAPPC12-208ENST00000437733 LCE3CQ5T5A8 94 aa2.73□□□□□ -1.97
TRAPPC12-208ENST00000437733 KRTAP19-8Q3LI54 63 aa2.72□□□□□ -1.97
TRAPPC12-208ENST00000437733 C10orf95Q9H7T3 257 aa2.68□□□□□ -1.98
TRAPPC12-208ENST00000437733 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
TRAPPC12-208ENST00000437733 MT1BP07438 61 aa2.67□□□□□ -1.98
TRAPPC12-208ENST00000437733 INE1O15225 51 aa2.63□□□□□ -1.99
TRAPPC12-208ENST00000437733 TNP1P09430 55 aa2.62□□□□□ -1.99
TRAPPC12-208ENST00000437733 MT1XP80297 61 aa2.6□□□□□ -1.99
TRAPPC12-208ENST00000437733 KRTAP4-3Q9BYR4 195 aa2.58□□□□□ -2
TRAPPC12-208ENST00000437733 PP632Q6XCG6 107 aa2.56□□□□□ -2
TRAPPC12-208ENST00000437733 USH2AO75445 5202 aa2.53□□□□□ -2
TRAPPC12-208ENST00000437733 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
TRAPPC12-208ENST00000437733 KRTAP19-6Q3LI70 58 aa2.49□□□□□ -2.01
TRAPPC12-208ENST00000437733 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
TRAPPC12-208ENST00000437733 LCE3AQ5TA76 89 aa2.49□□□□□ -2.01
TRAPPC12-208ENST00000437733 SSPOA2VEC9 5147 aa2.49□□□□□ -2.01
TRAPPC12-208ENST00000437733 KRTAP5-2Q701N4 177 aa2.43□□□□□ -2.02
TRAPPC12-208ENST00000437733 KRTAP8-1Q8IUC2 63 aa2.42□□□□□ -2.02
TRAPPC12-208ENST00000437733 KRTAP12-3P60328 96 aa2.39□□□□□ -2.03
TRAPPC12-208ENST00000437733 KRTAP19-5Q3LI72 72 aa2.36□□□□□ -2.03
TRAPPC12-208ENST00000437733 CRCT1Q9UGL9 99 aa2.35□□□□□ -2.03
TRAPPC12-208ENST00000437733 FCGBPQ9Y6R7 5405 aaPredicted RBP2.34□□□□□ -2.03
TRAPPC12-208ENST00000437733 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC12-208ENST00000437733 KRTAP19-7Q3SYF9 63 aa2.3□□□□□ -2.04
TRAPPC12-208ENST00000437733 FSIP2Q5CZC0 6907 aa2.28□□□□□ -2.04
TRAPPC12-208ENST00000437733 KMT2DO14686 5537 aa2.28□□□□□ -2.05
TRAPPC12-208ENST00000437733 MT1EP04732 61 aa2.27□□□□□ -2.05
TRAPPC12-208ENST00000437733 MT1LQ93083 61 aa2.23□□□□□ -2.05
TRAPPC12-208ENST00000437733 SPRR2FQ96RM1 72 aa2.22□□□□□ -2.05
TRAPPC12-208ENST00000437733 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
TRAPPC12-208ENST00000437733 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
TRAPPC12-208ENST00000437733 KRTAP19-3Q7Z4W3 81 aa2.18□□□□□ -2.06
TRAPPC12-208ENST00000437733 KRTAP6-3Q3LI67 103 aa2.17□□□□□ -2.06
TRAPPC12-208ENST00000437733 MT1GP13640 62 aa2.16□□□□□ -2.06
TRAPPC12-208ENST00000437733 MT1MQ8N339 61 aa2.15□□□□□ -2.07
TRAPPC12-208ENST00000437733 MUC12Q9UKN1 5478 aa2.13□□□□□ -2.07
TRAPPC12-208ENST00000437733 MACF1Q9UPN3 7388 aaKnown RBP2.12□□□□□ -2.07
TRAPPC12-208ENST00000437733 SPRR2EP22531 72 aa2.11□□□□□ -2.07
TRAPPC12-208ENST00000437733 SPRR2BP35325 72 aa2.11□□□□□ -2.07
TRAPPC12-208ENST00000437733 SPRR2AP35326 72 aa2.11□□□□□ -2.07
TRAPPC12-208ENST00000437733 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
TRAPPC12-208ENST00000437733 SPRR2DP22532 72 aa2.04□□□□□ -2.08
TRAPPC12-208ENST00000437733 MDN1Q9NU22 5596 aa2.03□□□□□ -2.08
TRAPPC12-208ENST00000437733 SYNE2Q8WXH0 6885 aaKnown RBP2.03□□□□□ -2.08
TRAPPC12-208ENST00000437733 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
TRAPPC12-208ENST00000437733 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
TRAPPC12-208ENST00000437733 KRTAP2-3P0C7H8 128 aa1.95□□□□□ -2.1
TRAPPC12-208ENST00000437733 KRTAP2-4Q9BYR9 128 aa1.95□□□□□ -2.1
TRAPPC12-208ENST00000437733 KRTAP2-1Q9BYU5 128 aa1.95□□□□□ -2.1
TRAPPC12-208ENST00000437733 MT1AP04731 61 aa1.91□□□□□ -2.1
TRAPPC12-208ENST00000437733 GPR98Q8WXG9 6306 aa1.9□□□□□ -2.11
TRAPPC12-208ENST00000437733 NEBP20929 6669 aa1.89□□□□□ -2.11
TRAPPC12-208ENST00000437733 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
TRAPPC12-208ENST00000437733 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
TRAPPC12-208ENST00000437733 KRTAP20-1Q3LI63 56 aa1.83□□□□□ -2.12
TRAPPC12-208ENST00000437733 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
TRAPPC12-208ENST00000437733 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
TRAPPC12-208ENST00000437733 MT4P47944 62 aa1.75□□□□□ -2.13
TRAPPC12-208ENST00000437733 KRTAP6-2Q3LI66 62 aa1.73□□□□□ -2.13
TRAPPC12-208ENST00000437733 KRTAP20-2Q3LI61 65 aa1.7□□□□□ -2.14
TRAPPC12-208ENST00000437733 SYNE1Q8NF91 8797 aaKnown RBP1.68□□□□□ -2.14
TRAPPC12-208ENST00000437733 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
TRAPPC12-208ENST00000437733 AHNAK2Q8IVF2 5795 aa1.59□□□□□ -2.15
TRAPPC12-208ENST00000437733 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
TRAPPC12-208ENST00000437733 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
TRAPPC12-208ENST00000437733 PRM1P04553 51 aa1.44□□□□□ -2.18
TRAPPC12-208ENST00000437733 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
TRAPPC12-208ENST00000437733 KRTAP5-10Q6L8G5 202 aa1.41□□□□□ -2.18
TRAPPC12-208ENST00000437733 MUC5ACP98088 5654 aa1.38□□□□□ -2.19
TRAPPC12-208ENST00000437733 PHGR1C9JFL3 82 aa1.04□□□□□ -2.24
TRAPPC12-208ENST00000437733 KRTAP21-1Q3LI58 79 aa0.93□□□□□ -2.26
TRAPPC12-208ENST00000437733 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 101 ms