RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 SPRR2DP22532 72 aa5.3□□□□□ -1.56
SKA2-202ENST00000437036 PMAIP1Q13794 54 aa5.3□□□□□ -1.56
SKA2-202ENST00000437036 LCE5AQ5TCM9 118 aa5.26□□□□□ -1.57
SKA2-202ENST00000437036 MT1GP13640 62 aa5.25□□□□□ -1.57
SKA2-202ENST00000437036 MT1LQ93083 61 aa5.25□□□□□ -1.57
SKA2-202ENST00000437036 KRTAP20-1Q3LI63 56 aa5.24□□□□□ -1.57
SKA2-202ENST00000437036 PRO0628Q9UI54 55 aa5.24□□□□□ -1.57
SKA2-202ENST00000437036 KRTAP2-3P0C7H8 128 aa5.21□□□□□ -1.58
SKA2-202ENST00000437036 KRTAP2-4Q9BYR9 128 aa5.21□□□□□ -1.58
SKA2-202ENST00000437036 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
SKA2-202ENST00000437036 MT1MQ8N339 61 aa5.14□□□□□ -1.59
SKA2-202ENST00000437036 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
SKA2-202ENST00000437036 LCE3BQ5TA77 95 aa5.12□□□□□ -1.59
SKA2-202ENST00000437036 KRTAP2-2Q9BYT5 123 aa5.07□□□□□ -1.6
SKA2-202ENST00000437036 KRTAP2-1Q9BYU5 128 aa5.07□□□□□ -1.6
SKA2-202ENST00000437036 DSTQ03001 7570 aaKnown RBP5□□□□□ -1.61
SKA2-202ENST00000437036 KRTAP4-7Q9BYR0 210 aa4.99□□□□□ -1.61
SKA2-202ENST00000437036 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
SKA2-202ENST00000437036 LCE3CQ5T5A8 94 aa4.96□□□□□ -1.62
SKA2-202ENST00000437036 PRAC1Q96KF2 57 aa4.96□□□□□ -1.62
SKA2-202ENST00000437036 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
SKA2-202ENST00000437036 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
SKA2-202ENST00000437036 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
SKA2-202ENST00000437036 SVIPQ8NHG7 77 aa4.69□□□□□ -1.66
SKA2-202ENST00000437036 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
SKA2-202ENST00000437036 KRTAP5-5Q701N2 237 aaPredicted RBP4.65□□□□□ -1.67
SKA2-202ENST00000437036 KRTAP4-9Q9BYQ8 210 aa4.63□□□□□ -1.67
SKA2-202ENST00000437036 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
SKA2-202ENST00000437036 MT4P47944 62 aa4.59□□□□□ -1.67
SKA2-202ENST00000437036 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
SKA2-202ENST00000437036 HMCN1Q96RW7 5635 aa4.54□□□□□ -1.68
SKA2-202ENST00000437036 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
SKA2-202ENST00000437036 MT1AP04731 61 aa4.49□□□□□ -1.69
SKA2-202ENST00000437036 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
SKA2-202ENST00000437036 KRTAP4-6Q9BYQ5 205 aa4.48□□□□□ -1.69
SKA2-202ENST00000437036 KRTAP6-1Q3LI64 71 aa4.42□□□□□ -1.7
SKA2-202ENST00000437036 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
SKA2-202ENST00000437036 KRTAP20-2Q3LI61 65 aa4.38□□□□□ -1.71
SKA2-202ENST00000437036 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
SKA2-202ENST00000437036 AHNAK2Q8IVF2 5795 aa4.26□□□□□ -1.73
SKA2-202ENST00000437036 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
SKA2-202ENST00000437036 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
SKA2-202ENST00000437036 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
SKA2-202ENST00000437036 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
SKA2-202ENST00000437036 KRTAP5-2Q701N4 177 aa4.15□□□□□ -1.75
SKA2-202ENST00000437036 MT3P25713 68 aa4.12□□□□□ -1.75
SKA2-202ENST00000437036 KRTAP5-10Q6L8G5 202 aa4.04□□□□□ -1.76
SKA2-202ENST00000437036 KRTAP4-11Q9BYQ6 195 aa3.92□□□□□ -1.78
SKA2-202ENST00000437036 KRTAP5-7Q6L8G8 165 aa3.85□□□□□ -1.79
SKA2-202ENST00000437036 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
SKA2-202ENST00000437036 KRTAP4-12Q9BQ66 201 aa3.8□□□□□ -1.8
SKA2-202ENST00000437036 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
SKA2-202ENST00000437036 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
SKA2-202ENST00000437036 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
SKA2-202ENST00000437036 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
SKA2-202ENST00000437036 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
SKA2-202ENST00000437036 KRTAP5-1Q6L8H4 278 aa3.64□□□□□ -1.83
SKA2-202ENST00000437036 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
SKA2-202ENST00000437036 H3BS24 57 aa3.57□□□□□ -1.84
SKA2-202ENST00000437036 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
SKA2-202ENST00000437036 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
SKA2-202ENST00000437036 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
SKA2-202ENST00000437036 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
SKA2-202ENST00000437036 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
SKA2-202ENST00000437036 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
SKA2-202ENST00000437036 A0A0A0MQY5 61 aa3.22□□□□□ -1.89
SKA2-202ENST00000437036 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
SKA2-202ENST00000437036 INE1O15225 51 aa3.1□□□□□ -1.91
SKA2-202ENST00000437036 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
SKA2-202ENST00000437036 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
SKA2-202ENST00000437036 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
SKA2-202ENST00000437036 PRM1P04553 51 aa2.85□□□□□ -1.95
SKA2-202ENST00000437036 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
SKA2-202ENST00000437036 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
SKA2-202ENST00000437036 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
SKA2-202ENST00000437036 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
SKA2-202ENST00000437036 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms