RNA–Protein interactions for RNA: ENST00000436769.5

COL6A2-206, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-206ENST00000436769 LCE3AQ5TA76 89 aa7.03□□□□□ -1.28
COL6A2-206ENST00000436769 C10orf95Q9H7T3 257 aa7.02□□□□□ -1.29
COL6A2-206ENST00000436769 A0A1B0GU69 56 aa7.01□□□□□ -1.29
COL6A2-206ENST00000436769 LINC01558Q9Y6Z2 57 aa7.01□□□□□ -1.29
COL6A2-206ENST00000436769 A8MU10 97 aa6.98□□□□□ -1.29
COL6A2-206ENST00000436769 RPS28P62857 69 aaKnown RBP6.98□□□□□ -1.29
COL6A2-206ENST00000436769 PRR15LQ9BU68 103 aa6.98□□□□□ -1.29
COL6A2-206ENST00000436769 SMIM26A0A096LP01 95 aa6.97□□□□□ -1.29
COL6A2-206ENST00000436769 KRTAP4-6Q9BYQ5 205 aa6.97□□□□□ -1.29
COL6A2-206ENST00000436769 V9GYY9 64 aa6.94□□□□□ -1.3
COL6A2-206ENST00000436769 KRTAP5-10Q6L8G5 202 aa6.93□□□□□ -1.3
COL6A2-206ENST00000436769 TNP1P09430 55 aa6.92□□□□□ -1.3
COL6A2-206ENST00000436769 Q1T7F1 81 aa6.88□□□□□ -1.31
COL6A2-206ENST00000436769 KRTAP4-7Q9BYR0 210 aa6.84□□□□□ -1.31
COL6A2-206ENST00000436769 UQCR11O14957 56 aa6.76□□□□□ -1.33
COL6A2-206ENST00000436769 KRTAP12-3P60328 96 aa6.74□□□□□ -1.33
COL6A2-206ENST00000436769 KRTAP5-3Q6L8H2 238 aa6.7□□□□□ -1.34
COL6A2-206ENST00000436769 KRTAP5-7Q6L8G8 165 aa6.68□□□□□ -1.34
COL6A2-206ENST00000436769 KRTAP5-5Q701N2 237 aaPredicted RBP6.67□□□□□ -1.34
COL6A2-206ENST00000436769 KRTAP20-2Q3LI61 65 aa6.66□□□□□ -1.34
COL6A2-206ENST00000436769 PSPHP1O15172 72 aa6.65□□□□□ -1.34
COL6A2-206ENST00000436769 SYNE1Q8NF91 8797 aaKnown RBP6.6□□□□□ -1.35
COL6A2-206ENST00000436769 SPRR5A0A1B0GTR4 108 aa6.59□□□□□ -1.35
COL6A2-206ENST00000436769 MIR22HGQ0VDD5 57 aa6.59□□□□□ -1.35
COL6A2-206ENST00000436769 LOC100996750A0A140TA64 210 aa6.49□□□□□ -1.37
COL6A2-206ENST00000436769 A6NED7 52 aa6.49□□□□□ -1.37
COL6A2-206ENST00000436769 KRTAP12-4P60329 112 aa6.49□□□□□ -1.37
COL6A2-206ENST00000436769 K7ERS5 55 aa6.44□□□□□ -1.38
COL6A2-206ENST00000436769 KRTAP25-1Q3LHN0 102 aa6.4□□□□□ -1.38
COL6A2-206ENST00000436769 CDC42SE1Q9NRR8 79 aa6.37□□□□□ -1.39
COL6A2-206ENST00000436769 KRTAP19-4Q3LI73 84 aa6.34□□□□□ -1.39
COL6A2-206ENST00000436769 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.42
COL6A2-206ENST00000436769 LCE3CQ5T5A8 94 aa6.2□□□□□ -1.42
COL6A2-206ENST00000436769 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
COL6A2-206ENST00000436769 KRTAP4-11Q9BYQ6 195 aa6.15□□□□□ -1.42
COL6A2-206ENST00000436769 KRTAP5-2Q701N4 177 aa6.14□□□□□ -1.43
COL6A2-206ENST00000436769 MT1AP04731 61 aa6.09□□□□□ -1.43
COL6A2-206ENST00000436769 KRTAP6-1Q3LI64 71 aa6.09□□□□□ -1.43
COL6A2-206ENST00000436769 ROMO1P60602 79 aa6.05□□□□□ -1.44
COL6A2-206ENST00000436769 BRK1Q8WUW1 75 aa6.05□□□□□ -1.44
COL6A2-206ENST00000436769 AHNAKQ09666 5890 aaKnown RBP5.98□□□□□ -1.45
COL6A2-206ENST00000436769 KRTAP5-8O75690 187 aa5.97□□□□□ -1.45
COL6A2-206ENST00000436769 OBSCNQ5VST9 7968 aa5.95□□□□□ -1.46
COL6A2-206ENST00000436769 MUC5BQ9HC84 5762 aaPredicted RBP5.94□□□□□ -1.46
COL6A2-206ENST00000436769 KRTAP9-4Q9BYQ2 154 aa5.93□□□□□ -1.46
COL6A2-206ENST00000436769 MUC5ACP98088 5654 aa5.91□□□□□ -1.46
COL6A2-206ENST00000436769 KRTAP9-6A8MVA2 160 aa5.91□□□□□ -1.46
COL6A2-206ENST00000436769 KRTAP6-2Q3LI66 62 aa5.86□□□□□ -1.47
COL6A2-206ENST00000436769 PRO0628Q9UI54 55 aa5.77□□□□□ -1.49
COL6A2-206ENST00000436769 PMAIP1Q13794 54 aa5.76□□□□□ -1.49
COL6A2-206ENST00000436769 KRTAP9-9Q9BYP9 154 aa5.65□□□□□ -1.5
COL6A2-206ENST00000436769 MT3P25713 68 aa5.57□□□□□ -1.52
COL6A2-206ENST00000436769 KRTAP5-1Q6L8H4 278 aa5.56□□□□□ -1.52
COL6A2-206ENST00000436769 KTN1-AS1Q86SY8 53 aa5.39□□□□□ -1.55
COL6A2-206ENST00000436769 PRAC1Q96KF2 57 aa5.32□□□□□ -1.56
COL6A2-206ENST00000436769 LCE1EQ5T753 118 aa5.21□□□□□ -1.58
COL6A2-206ENST00000436769 SVIPQ8NHG7 77 aa5.05□□□□□ -1.6
COL6A2-206ENST00000436769 KRTAP4-2Q9BYR5 136 aa4.96□□□□□ -1.62
COL6A2-206ENST00000436769 LCE1BQ5T7P3 118 aa4.89□□□□□ -1.63
COL6A2-206ENST00000436769 LCE1CQ5T751 118 aa4.84□□□□□ -1.63
COL6A2-206ENST00000436769 KRTAP4-12Q9BQ66 201 aa4.58□□□□□ -1.68
COL6A2-206ENST00000436769 LUZP6Q538Z0 58 aa4.57□□□□□ -1.68
COL6A2-206ENST00000436769 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
COL6A2-206ENST00000436769 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
COL6A2-206ENST00000436769 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.38□□□□□ -1.71
COL6A2-206ENST00000436769 LCE1FQ5T754 118 aa4.34□□□□□ -1.71
COL6A2-206ENST00000436769 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
COL6A2-206ENST00000436769 KRTAP21-2Q3LI59 83 aa4.04□□□□□ -1.76
COL6A2-206ENST00000436769 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
COL6A2-206ENST00000436769 PHGR1C9JFL3 82 aa4.01□□□□□ -1.77
COL6A2-206ENST00000436769 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
COL6A2-206ENST00000436769 MUC19Q7Z5P9 8384 aa3.69□□□□□ -1.82
COL6A2-206ENST00000436769 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
COL6A2-206ENST00000436769 INE1O15225 51 aa3.45□□□□□ -1.86
COL6A2-206ENST00000436769 H3BS24 57 aa3.39□□□□□ -1.87
COL6A2-206ENST00000436769 PRM1P04553 51 aa3.06□□□□□ -1.92
COL6A2-206ENST00000436769 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
COL6A2-206ENST00000436769 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 65.8 ms