RNA–Protein interactions for RNA: ENST00000436754.5

PDLIM2-211, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-211ENST00000436754 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
PDLIM2-211ENST00000436754 KRTAP19-7Q3SYF9 63 aa4.1□□□□□ -1.75
PDLIM2-211ENST00000436754 MT1EP04732 61 aa4.08□□□□□ -1.76
PDLIM2-211ENST00000436754 KRTAP19-3Q7Z4W3 81 aa4.07□□□□□ -1.76
PDLIM2-211ENST00000436754 KRTAP4-9Q9BYQ8 210 aa4.06□□□□□ -1.76
PDLIM2-211ENST00000436754 PMAIP1Q13794 54 aa4.03□□□□□ -1.76
PDLIM2-211ENST00000436754 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
PDLIM2-211ENST00000436754 TNP1P09430 55 aa4.02□□□□□ -1.77
PDLIM2-211ENST00000436754 C10orf95Q9H7T3 257 aa4.02□□□□□ -1.77
PDLIM2-211ENST00000436754 MT1GP13640 62 aa3.98□□□□□ -1.77
PDLIM2-211ENST00000436754 LCE3AQ5TA76 89 aa3.97□□□□□ -1.77
PDLIM2-211ENST00000436754 LCE1DQ5T752 114 aa3.96□□□□□ -1.78
PDLIM2-211ENST00000436754 LCE4AQ5TA78 99 aa3.94□□□□□ -1.78
PDLIM2-211ENST00000436754 PP632Q6XCG6 107 aa3.93□□□□□ -1.78
PDLIM2-211ENST00000436754 ROMO1P60602 79 aa3.9□□□□□ -1.79
PDLIM2-211ENST00000436754 MT1LQ93083 61 aa3.9□□□□□ -1.79
PDLIM2-211ENST00000436754 MT1MQ8N339 61 aa3.88□□□□□ -1.79
PDLIM2-211ENST00000436754 HMCN1Q96RW7 5635 aa3.86□□□□□ -1.79
PDLIM2-211ENST00000436754 MT4P47944 62 aa3.86□□□□□ -1.79
PDLIM2-211ENST00000436754 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
PDLIM2-211ENST00000436754 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
PDLIM2-211ENST00000436754 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
PDLIM2-211ENST00000436754 KRTAP25-1Q3LHN0 102 aa3.81□□□□□ -1.8
PDLIM2-211ENST00000436754 AHNAK2Q8IVF2 5795 aa3.8□□□□□ -1.8
PDLIM2-211ENST00000436754 KRTAP5-10Q6L8G5 202 aa3.79□□□□□ -1.8
PDLIM2-211ENST00000436754 KRTAP4-3Q9BYR4 195 aa3.79□□□□□ -1.8
PDLIM2-211ENST00000436754 KRTAP4-6Q9BYQ5 205 aa3.76□□□□□ -1.81
PDLIM2-211ENST00000436754 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
PDLIM2-211ENST00000436754 KRTAP4-7Q9BYR0 210 aa3.72□□□□□ -1.81
PDLIM2-211ENST00000436754 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
PDLIM2-211ENST00000436754 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
PDLIM2-211ENST00000436754 KRTAP23-1A1A580 65 aa3.64□□□□□ -1.83
PDLIM2-211ENST00000436754 SPRR5A0A1B0GTR4 108 aa3.61□□□□□ -1.83
PDLIM2-211ENST00000436754 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
PDLIM2-211ENST00000436754 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
PDLIM2-211ENST00000436754 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
PDLIM2-211ENST00000436754 KRTAP19-4Q3LI73 84 aa3.57□□□□□ -1.84
PDLIM2-211ENST00000436754 KRTAP12-4P60329 112 aa3.54□□□□□ -1.84
PDLIM2-211ENST00000436754 LOC100996750A0A140TA64 210 aa3.52□□□□□ -1.85
PDLIM2-211ENST00000436754 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
PDLIM2-211ENST00000436754 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
PDLIM2-211ENST00000436754 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
PDLIM2-211ENST00000436754 MT1AP04731 61 aa3.33□□□□□ -1.88
PDLIM2-211ENST00000436754 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
PDLIM2-211ENST00000436754 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
PDLIM2-211ENST00000436754 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
PDLIM2-211ENST00000436754 H3BS24 57 aa3.25□□□□□ -1.89
PDLIM2-211ENST00000436754 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
PDLIM2-211ENST00000436754 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
PDLIM2-211ENST00000436754 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
PDLIM2-211ENST00000436754 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
PDLIM2-211ENST00000436754 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.9
PDLIM2-211ENST00000436754 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
PDLIM2-211ENST00000436754 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
PDLIM2-211ENST00000436754 MUC5BQ9HC84 5762 aaPredicted RBP3.15□□□□□ -1.91
PDLIM2-211ENST00000436754 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
PDLIM2-211ENST00000436754 MT3P25713 68 aa3.04□□□□□ -1.92
PDLIM2-211ENST00000436754 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
PDLIM2-211ENST00000436754 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
PDLIM2-211ENST00000436754 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
PDLIM2-211ENST00000436754 A0A0A0MQY5 61 aa2.83□□□□□ -1.96
PDLIM2-211ENST00000436754 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
PDLIM2-211ENST00000436754 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
PDLIM2-211ENST00000436754 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
PDLIM2-211ENST00000436754 INE1O15225 51 aa2.56□□□□□ -2
PDLIM2-211ENST00000436754 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
PDLIM2-211ENST00000436754 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
PDLIM2-211ENST00000436754 LCE3EQ5T5B0 92 aa2.41□□□□□ -2.02
PDLIM2-211ENST00000436754 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
PDLIM2-211ENST00000436754 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
PDLIM2-211ENST00000436754 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
PDLIM2-211ENST00000436754 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
PDLIM2-211ENST00000436754 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
PDLIM2-211ENST00000436754 PRM1P04553 51 aa2.01□□□□□ -2.09
PDLIM2-211ENST00000436754 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
PDLIM2-211ENST00000436754 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
PDLIM2-211ENST00000436754 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
PDLIM2-211ENST00000436754 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 64.9 ms