RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 MDN1Q9NU22 5596 aa7.66□□□□□ -1.18
YBX1-203ENST00000436427 SPRR2EP22531 72 aa7.63□□□□□ -1.19
YBX1-203ENST00000436427 SPRR2BP35325 72 aa7.63□□□□□ -1.19
YBX1-203ENST00000436427 SPRR2AP35326 72 aa7.63□□□□□ -1.19
YBX1-203ENST00000436427 MT1LQ93083 61 aa7.62□□□□□ -1.19
YBX1-203ENST00000436427 LCE1AQ5T7P2 110 aa7.61□□□□□ -1.19
YBX1-203ENST00000436427 KRTAP19-3Q7Z4W3 81 aa7.6□□□□□ -1.19
YBX1-203ENST00000436427 LUZP6Q538Z0 58 aa7.56□□□□□ -1.2
YBX1-203ENST00000436427 SPRR5A0A1B0GTR4 108 aa7.53□□□□□ -1.2
YBX1-203ENST00000436427 LOC100996750A0A140TA64 210 aa7.5□□□□□ -1.21
YBX1-203ENST00000436427 KRTAP4-6Q9BYQ5 205 aa7.5□□□□□ -1.21
YBX1-203ENST00000436427 MT1GP13640 62 aa7.49□□□□□ -1.21
YBX1-203ENST00000436427 LCE5AQ5TCM9 118 aa7.49□□□□□ -1.21
YBX1-203ENST00000436427 NDUFAF8A1L188 74 aa7.47□□□□□ -1.21
YBX1-203ENST00000436427 NEBP20929 6669 aa7.42□□□□□ -1.22
YBX1-203ENST00000436427 MT1MQ8N339 61 aa7.4□□□□□ -1.22
YBX1-203ENST00000436427 KRTAP19-4Q3LI73 84 aa7.38□□□□□ -1.23
YBX1-203ENST00000436427 SPRR2DP22532 72 aa7.37□□□□□ -1.23
YBX1-203ENST00000436427 KRTAP4-7Q9BYR0 210 aa7.35□□□□□ -1.23
YBX1-203ENST00000436427 LCE3CQ5T5A8 94 aa7.34□□□□□ -1.23
YBX1-203ENST00000436427 KRTAP4-3Q9BYR4 195 aa7.24□□□□□ -1.25
YBX1-203ENST00000436427 KRTAP20-1Q3LI63 56 aa7.15□□□□□ -1.27
YBX1-203ENST00000436427 DSTQ03001 7570 aaKnown RBP7.09□□□□□ -1.27
YBX1-203ENST00000436427 LCE3BQ5TA77 95 aa7.09□□□□□ -1.27
YBX1-203ENST00000436427 KRTAP2-3P0C7H8 128 aa7.02□□□□□ -1.29
YBX1-203ENST00000436427 KRTAP2-4Q9BYR9 128 aa7.02□□□□□ -1.29
YBX1-203ENST00000436427 H3BS24 57 aa7□□□□□ -1.29
YBX1-203ENST00000436427 KRTAP9-6A8MVA2 160 aa6.91□□□□□ -1.3
YBX1-203ENST00000436427 KRTAP2-2Q9BYT5 123 aa6.86□□□□□ -1.31
YBX1-203ENST00000436427 KRTAP2-1Q9BYU5 128 aa6.86□□□□□ -1.31
YBX1-203ENST00000436427 A0A0A0MQY5 61 aa6.74□□□□□ -1.33
YBX1-203ENST00000436427 KRTAP5-5Q701N2 237 aaPredicted RBP6.68□□□□□ -1.34
YBX1-203ENST00000436427 KRTAP4-12Q9BQ66 201 aa6.59□□□□□ -1.35
YBX1-203ENST00000436427 KRTAP5-4Q6L8H1 288 aa6.53□□□□□ -1.36
YBX1-203ENST00000436427 LCE4AQ5TA78 99 aa6.5□□□□□ -1.37
YBX1-203ENST00000436427 MT1AP04731 61 aa6.48□□□□□ -1.37
YBX1-203ENST00000436427 KRTAP6-1Q3LI64 71 aa6.43□□□□□ -1.38
YBX1-203ENST00000436427 KRTAP4-9Q9BYQ8 210 aa6.42□□□□□ -1.38
YBX1-203ENST00000436427 MT4P47944 62 aa6.41□□□□□ -1.38
YBX1-203ENST00000436427 KRTAP9-9Q9BYP9 154 aa6.41□□□□□ -1.38
YBX1-203ENST00000436427 KRTAP9-4Q9BYQ2 154 aa6.41□□□□□ -1.38
YBX1-203ENST00000436427 KRTAP12-4P60329 112 aa6.33□□□□□ -1.4
YBX1-203ENST00000436427 LCE1DQ5T752 114 aa6.33□□□□□ -1.4
YBX1-203ENST00000436427 SYNE1Q8NF91 8797 aaKnown RBP6.32□□□□□ -1.4
YBX1-203ENST00000436427 INE1O15225 51 aa6.25□□□□□ -1.41
YBX1-203ENST00000436427 HMCN1Q96RW7 5635 aa6.22□□□□□ -1.41
YBX1-203ENST00000436427 KRTAP20-2Q3LI61 65 aa6.15□□□□□ -1.43
YBX1-203ENST00000436427 KRTAP6-2Q3LI66 62 aa5.99□□□□□ -1.45
YBX1-203ENST00000436427 GPR98Q8WXG9 6306 aa5.92□□□□□ -1.46
YBX1-203ENST00000436427 KRTAP5-3Q6L8H2 238 aa5.91□□□□□ -1.46
YBX1-203ENST00000436427 MT3P25713 68 aa5.9□□□□□ -1.46
YBX1-203ENST00000436427 KRTAP5-2Q701N4 177 aa5.87□□□□□ -1.47
YBX1-203ENST00000436427 KRTAP4-2Q9BYR5 136 aa5.84□□□□□ -1.48
YBX1-203ENST00000436427 KRTAP4-11Q9BYQ6 195 aa5.73□□□□□ -1.49
YBX1-203ENST00000436427 AHNAK2Q8IVF2 5795 aa5.67□□□□□ -1.5
YBX1-203ENST00000436427 KRTAP5-10Q6L8G5 202 aa5.58□□□□□ -1.52
YBX1-203ENST00000436427 LCE3DQ9BYE3 92 aa5.52□□□□□ -1.53
YBX1-203ENST00000436427 OBSCNQ5VST9 7968 aa5.45□□□□□ -1.54
YBX1-203ENST00000436427 LCE3EQ5T5B0 92 aa5.41□□□□□ -1.54
YBX1-203ENST00000436427 KRTAP5-7Q6L8G8 165 aa5.37□□□□□ -1.55
YBX1-203ENST00000436427 KRTAP5-8O75690 187 aa5.2□□□□□ -1.58
YBX1-203ENST00000436427 LCE1EQ5T753 118 aa5.18□□□□□ -1.58
YBX1-203ENST00000436427 KRTAP5-1Q6L8H4 278 aa5.13□□□□□ -1.59
YBX1-203ENST00000436427 MUC5ACP98088 5654 aa4.93□□□□□ -1.62
YBX1-203ENST00000436427 LCE1BQ5T7P3 118 aa4.91□□□□□ -1.62
YBX1-203ENST00000436427 LCE1CQ5T751 118 aa4.82□□□□□ -1.64
YBX1-203ENST00000436427 PRM1P04553 51 aa4.8□□□□□ -1.64
YBX1-203ENST00000436427 AHNAKQ09666 5890 aaKnown RBP4.64□□□□□ -1.67
YBX1-203ENST00000436427 MUC5BQ9HC84 5762 aaPredicted RBP4.63□□□□□ -1.67
YBX1-203ENST00000436427 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.46□□□□□ -1.69
YBX1-203ENST00000436427 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
YBX1-203ENST00000436427 KRTAP21-2Q3LI59 83 aa4.21□□□□□ -1.74
YBX1-203ENST00000436427 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
YBX1-203ENST00000436427 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
YBX1-203ENST00000436427 PHGR1C9JFL3 82 aa3.69□□□□□ -1.82
YBX1-203ENST00000436427 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
YBX1-203ENST00000436427 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
YBX1-203ENST00000436427 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 8.7 ms